NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001172779.2 → NP_001166250.1 leucine-rich repeat-containing protein 34 isoform 2
See identical proteins and their annotated locations for NP_001166250.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate 3' splice pattern with additional 3' coding exons, compared to variant 1. The resulting isoform (2) has a longer and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC078795, AK293661, BC032841, DB500348
- Consensus CDS
-
CCDS54672.1
- UniProtKB/Swiss-Prot
- B4DEJ7, E9PBH2, G5E9T7, Q8IZ02
- UniProtKB/TrEMBL
-
B4DYJ4
- Related
- ENSP00000414635.1, ENST00000446859.7
- Conserved Domains (2) summary
-
- sd00033
Location:153 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cl26161
Location:147 → 396
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
NM_001172780.2 → NP_001166251.1 leucine-rich repeat-containing protein 34 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
- Source sequence(s)
-
AC078795, AK295065, CN479293, DB500348
- UniProtKB/TrEMBL
-
B4DHF2
- Conserved Domains (2) summary
-
- cd00116
Location:147 → 356
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:153 → 180
- LRR_RI; leucine-rich repeat [structural motif]
-
NM_001363888.2 → NP_001350817.1 leucine-rich repeat-containing protein 34 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence and the 3' UTR and coding sequence compared to variant 1. The resulting isoform (4) is shorter at the N-terminus and has a longer and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC078795
- Consensus CDS
-
CCDS87166.1
- UniProtKB/TrEMBL
- B4DYJ4, G3V115
- Related
- ENSP00000429593.1, ENST00000522830.5
- Conserved Domains (2) summary
-
- sd00033
Location:92 → 119
- LRR_RI; leucine-rich repeat [structural motif]
- cl26161
Location:86 → 335
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
NM_001370608.1 → NP_001357537.1 leucine-rich repeat-containing protein 34 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC078795
- Conserved Domains (2) summary
-
- sd00033
Location:92 → 118
- LRR_RI; leucine-rich repeat [structural motif]
- cl29113
Location:86 → 334
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
NM_001370609.1 → NP_001357538.1 leucine-rich repeat-containing protein 34 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC078795
- UniProtKB/TrEMBL
- B3KT77, B4DHF2
- Related
-
ENST00000522596.6
- Conserved Domains (2) summary
-
- sd00033
Location:92 → 119
- LRR_RI; leucine-rich repeat [structural motif]
- cl29113
Location:86 → 295
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
NM_153353.5 → NP_699184.2 leucine-rich repeat-containing protein 34 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the central coding region and uses an alternate 3' splice pattern with additional 3' coding exons, compared to variant 1. The resulting isoform (3) lacks an internal segment and has a longer and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC078795, AK293661, BC032841, DB500348
- Consensus CDS
-
CCDS3208.2
- UniProtKB/TrEMBL
-
B4DYJ4
- Related
- ENSP00000429278.2, ENST00000522526.6
- Conserved Domains (4) summary
-
- cd00116
Location:147 → 364
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:153 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- sd00034
Location:125 → 151
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam13855
Location:262 → 331
- LRR_8; Leucine rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
169793003..169812904 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006713508.5 → XP_006713571.1 leucine-rich repeat-containing protein 34 isoform X2
- UniProtKB/TrEMBL
-
B4DYJ4
- Conserved Domains (3) summary
-
- cd00116
Location:129 → 378
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:135 → 162
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:276 → 345
- LRR_8; Leucine rich repeat
-
XM_011512442.3 → XP_011510744.1 leucine-rich repeat-containing protein 34 isoform X1
- Conserved Domains (3) summary
-
- cd00116
Location:147 → 395
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:153 → 179
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:293 → 362
- LRR_8; Leucine rich repeat
-
XM_047447492.1 → XP_047303448.1 leucine-rich repeat-containing protein 34 isoform X4
-
XM_047447491.1 → XP_047303447.1 leucine-rich repeat-containing protein 34 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
172577228..172597130 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345340.1 → XP_054201315.1 leucine-rich repeat-containing protein 34 isoform X2
- UniProtKB/TrEMBL
-
B4DYJ4
-
XM_054345339.1 → XP_054201314.1 leucine-rich repeat-containing protein 34 isoform X1
-
XM_054345342.1 → XP_054201317.1 leucine-rich repeat-containing protein 34 isoform X4
-
XM_054345341.1 → XP_054201316.1 leucine-rich repeat-containing protein 34 isoform X3