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    IGIP IgA inducing protein [ Homo sapiens (human) ]

    Gene ID: 492311, updated on 27-Nov-2024

    Summary

    Official Symbol
    IGIPprovided by HGNC
    Official Full Name
    IgA inducing proteinprovided by HGNC
    Primary source
    HGNC:HGNC:33847
    See related
    Ensembl:ENSG00000182700 AllianceGenome:HGNC:33847
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C5orf53
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See IGIP in Genome Data Viewer
    Location:
    5q31.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (140125937..140129392)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (140651032..140654487)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (139505522..139508977)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900193 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23259 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16440 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16441 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16442 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:139487907-139488408 Neighboring gene mitosis associated long intergenic non-coding RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16443 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16444 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23260 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139494224-139494861 Neighboring gene purine rich element binding protein A Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139525474-139526020 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139526021-139526567 Neighboring gene uncharacterized LOC124901086 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139533596-139534255 Neighboring gene uncharacterized LOC101929719 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:139549390-139549585 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23262 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16446 Neighboring gene cysteine rich transmembrane module containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23264 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:139618811-139619649 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139620488-139621326 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:139621327-139622163

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    IgA-inducing protein homolog
    Names
    IgA-inducing protein homolog (Bos taurus)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007189.2NP_001007190.1  IgA-inducing protein homolog precursor

      See identical proteins and their annotated locations for NP_001007190.1

      Status: VALIDATED

      Source sequence(s)
      AC011379, BC017422, BC041380, CD516511
      Consensus CDS
      CCDS34244.1
      UniProtKB/Swiss-Prot
      A6NJ69
      UniProtKB/TrEMBL
      A0A158RFU4
      Related
      ENSP00000327344.3, ENST00000333305.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      140125937..140129392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      140651032..140654487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)