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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009444.1 RefSeqGene
- Range
-
4992..115268
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_004225.3 → NP_004216.2 malignant fibrous histiocytoma-amplified sequence 1
See identical proteins and their annotated locations for NP_004216.2
Status: REVIEWED
- Source sequence(s)
-
AC090567, AK027007
- Consensus CDS
-
CCDS34844.1
- UniProtKB/Swiss-Prot
- Q96CI0, Q9Y4C4
- UniProtKB/TrEMBL
-
A0AAG2THC5
- Related
- ENSP00000276282.6, ENST00000276282.7
- Conserved Domains (5) summary
-
- cd00116
Location:124 → 354
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:113 → 136
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:88 → 147
- LRR_8; Leucine rich repeat
- pfam16095
Location:660 → 906
- COR; C-terminal of Roc, COR, domain
- cl21455
Location:409 → 552
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
8783354..8893630 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422419.1 → XP_047278375.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X1
- UniProtKB/TrEMBL
-
A0AAG2THC5
-
XM_011543852.4 → XP_011542154.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X2
- UniProtKB/TrEMBL
-
A0AAG2THC5
- Conserved Domains (5) summary
-
- cd00116
Location:124 → 354
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:113 → 136
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:88 → 147
- LRR_8; Leucine rich repeat
- pfam16095
Location:660 → 906
- COR; C-terminal of Roc, COR, domain
- cl21455
Location:409 → 552
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Reference GRCh38.p14 PATCHES
Genomic
-
NW_018654717.1 Reference GRCh38.p14 PATCHES
- Range
-
4458341..4568641
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054332281.1 → XP_054188256.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X1
- UniProtKB/TrEMBL
-
A0AAG2THC5
-
XM_054332282.1 → XP_054188257.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X2
- UniProtKB/TrEMBL
-
A0AAG2THC5
RNA
-
XR_008485756.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
10850500..10960846
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361505.1 → XP_054217480.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X1
- UniProtKB/TrEMBL
-
A0AAG2THC5
-
XM_054361506.1 → XP_054217481.1 malignant fibrous histiocytoma-amplified sequence 1 isoform X2
- UniProtKB/TrEMBL
-
A0AAG2THC5
RNA
-
XR_008487895.1 RNA Sequence