NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286462.2 → NP_001273391.1 uncharacterized protein C21orf58 isoform 2
See identical proteins and their annotated locations for NP_001273391.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate 5' terminal exon, uses alternate acceptor splice sites at 2 internal exons and is alternatively spliced at the 3' end compared to variant 1. The differences at the 5' end result in translation initiation from an alternate start codon, and a shorter isoform (2) with a distinct N-terminus compared to isoform 1. Variants 2-5 encode the same isoform.
- Source sequence(s)
-
AK056387, BC028934, CB305953
- Consensus CDS
-
CCDS68229.1
- UniProtKB/Swiss-Prot
-
P58505
- Related
- ENSP00000380799.1, ENST00000397683.5
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
NM_001286463.1 → NP_001273392.1 uncharacterized protein C21orf58 isoform 2
See identical proteins and their annotated locations for NP_001273392.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses alternate acceptor splice sites at 2 internal exons that results in translation initiation from an alternate start codon compared to variant 1. The resulting shorter isoform (2) has a distinct N-terminus compared to isoform 1. Variants 2-5 encode the same isoform.
- Source sequence(s)
-
AK056387, AK096641, AK098098, BM475055
- Consensus CDS
-
CCDS68229.1
- UniProtKB/Swiss-Prot
-
P58505
- Related
- ENSP00000380796.1, ENST00000397679.5
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
NM_001286476.2 → NP_001273405.1 uncharacterized protein C21orf58 isoform 2
See identical proteins and their annotated locations for NP_001273405.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses alternate acceptor splice sites at 2 internal exons and is alternatively spliced at the 3' end compared to variant 1. The differences at the 5' end result in translation initiation from an alternate start codon, and a shorter isoform (2) with a distinct N-terminus compared to isoform 1. Variants 2-5 encode the same isoform.
- Source sequence(s)
-
AP000471
- Consensus CDS
-
CCDS68229.1
- UniProtKB/Swiss-Prot
-
P58505
- Related
- ENSP00000380798.3, ENST00000397682.7
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
NM_001286477.2 → NP_001273406.1 uncharacterized protein C21orf58 isoform 2
See identical proteins and their annotated locations for NP_001273406.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses alternate splice sites at the 5' terminal exon and an internal exon that results in translation initiation from an alternate start codon compared to variant 1. The resulting shorter isoform (2) has a distinct N-terminus compared to isoform 1. Variants 2-5 encode the same isoform.
- Source sequence(s)
-
AP000471
- Consensus CDS
-
CCDS68229.1
- UniProtKB/Swiss-Prot
-
P58505
- Related
- ENSP00000380797.1, ENST00000397680.5
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
NM_058180.5 → NP_478060.2 uncharacterized protein C21orf58 isoform 1
See identical proteins and their annotated locations for NP_478060.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AP000471
- Consensus CDS
-
CCDS13735.1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
- Related
- ENSP00000291691.8, ENST00000291691.12
- Conserved Domains (1) summary
-
- pfam15248
Location:234 → 291
- DUF4587; Domain of unknown function (DUF4587)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000021.9 Reference GRCh38.p14 Primary Assembly
- Range
-
46300430..46323870 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006724018.5 → XP_006724081.1 uncharacterized protein C21orf58 isoform X4
- UniProtKB/TrEMBL
-
H0YCB6
- Conserved Domains (1) summary
-
- pfam15248
Location:234 → 268
- DUF4587; Domain of unknown function (DUF4587)
-
XM_011529619.4 → XP_011527921.1 uncharacterized protein C21orf58 isoform X1
See identical proteins and their annotated locations for XP_011527921.1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
- Conserved Domains (1) summary
-
- pfam15248
Location:234 → 291
- DUF4587; Domain of unknown function (DUF4587)
-
XM_047440894.1 → XP_047296850.1 uncharacterized protein C21orf58 isoform X6
- UniProtKB/TrEMBL
-
H0YCB6
- Related
- ENSP00000431312.1, ENST00000491666.5
-
XM_011529620.4 → XP_011527922.1 uncharacterized protein C21orf58 isoform X1
See identical proteins and their annotated locations for XP_011527922.1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
- Conserved Domains (1) summary
-
- pfam15248
Location:234 → 291
- DUF4587; Domain of unknown function (DUF4587)
-
XM_047440893.1 → XP_047296849.1 uncharacterized protein C21orf58 isoform X2
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_047440892.1 → XP_047296848.1 uncharacterized protein C21orf58 isoform X2
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_005261148.6 → XP_005261205.1 uncharacterized protein C21orf58 isoform X1
See identical proteins and their annotated locations for XP_005261205.1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
- Conserved Domains (1) summary
-
- pfam15248
Location:234 → 291
- DUF4587; Domain of unknown function (DUF4587)
-
XM_011529623.4 → XP_011527925.1 uncharacterized protein C21orf58 isoform X3
- UniProtKB/TrEMBL
-
H7C1T9
- Conserved Domains (1) summary
-
- pfam15248
Location:207 → 264
- DUF4587; Domain of unknown function (DUF4587)
-
XM_047440895.1 → XP_047296851.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
- Related
- ENSP00000402356.1, ENST00000417060.5
-
XM_017028392.2 → XP_016883881.1 uncharacterized protein C21orf58 isoform X8
- UniProtKB/Swiss-Prot
-
P58505
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
XM_017028393.2 → XP_016883882.1 uncharacterized protein C21orf58 isoform X8
- UniProtKB/Swiss-Prot
-
P58505
- Conserved Domains (1) summary
-
- pfam15248
Location:128 → 185
- DUF4587; Domain of unknown function (DUF4587)
-
XM_011529624.3 → XP_011527926.1 uncharacterized protein C21orf58 isoform X5
- Conserved Domains (1) summary
-
- pfam15248
Location:169 → 226
- DUF4587; Domain of unknown function (DUF4587)
-
XM_047440896.1 → XP_047296852.1 uncharacterized protein C21orf58 isoform X10
- UniProtKB/TrEMBL
- A6NL84, Q0VAL7
-
XM_011529628.3 → XP_011527930.1 uncharacterized protein C21orf58 isoform X9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060945.1 Alternate T2T-CHM13v2.0
- Range
-
44685809..44709216 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054324643.1 → XP_054180618.1 uncharacterized protein C21orf58 isoform X4
- UniProtKB/TrEMBL
-
H0YCB6
-
XM_054324638.1 → XP_054180613.1 uncharacterized protein C21orf58 isoform X1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324639.1 → XP_054180614.1 uncharacterized protein C21orf58 isoform X1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324645.1 → XP_054180620.1 uncharacterized protein C21orf58 isoform X6
- UniProtKB/TrEMBL
-
H0YCB6
-
XM_054324641.1 → XP_054180616.1 uncharacterized protein C21orf58 isoform X2
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324640.1 → XP_054180615.1 uncharacterized protein C21orf58 isoform X2
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324637.1 → XP_054180612.1 uncharacterized protein C21orf58 isoform X1
- UniProtKB/Swiss-Prot
- B3KPI1, P58505, Q8N7N9
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324649.1 → XP_054180624.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324646.1 → XP_054180621.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324642.1 → XP_054180617.1 uncharacterized protein C21orf58 isoform X3
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324647.1 → XP_054180622.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324650.1 → XP_054180625.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324648.1 → XP_054180623.1 uncharacterized protein C21orf58 isoform X7
- UniProtKB/TrEMBL
-
H7C1T9
-
XM_054324652.1 → XP_054180627.1 uncharacterized protein C21orf58 isoform X8
-
XM_054324651.1 → XP_054180626.1 uncharacterized protein C21orf58 isoform X8
-
XM_054324644.1 → XP_054180619.1 uncharacterized protein C21orf58 isoform X5
-
XM_054324654.1 → XP_054180629.1 uncharacterized protein C21orf58 isoform X10
- UniProtKB/TrEMBL
- A6NL84, Q0VAL7
-
XM_054324653.1 → XP_054180628.1 uncharacterized protein C21orf58 isoform X9
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_199071.2: Suppressed sequence
- Description
- NM_199071.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.