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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001267576.2 → NP_001254505.1 ubiquitin carboxyl-terminal hydrolase 43 isoform 2
See identical proteins and their annotated locations for NP_001254505.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks a segment in the 3' coding region, compared to variant 1, which results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AC118755, AJ583817, BC039653, BC136368
- Consensus CDS
-
CCDS58516.1
- UniProtKB/Swiss-Prot
-
Q70EL4
- Related
- ENSP00000458963.1, ENST00000570475.5
- Conserved Domains (3) summary
-
- cd02674
Location:540 → 703
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:102 → 284
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam12300
Location:36 → 107
- DUF3628; Protein of unknown function (DUF3628)
-
NM_153210.5 → NP_694942.3 ubiquitin carboxyl-terminal hydrolase 43 isoform 1
See identical proteins and their annotated locations for NP_694942.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC118755, AJ583817, BC039653, BC144041
- Consensus CDS
-
CCDS45610.1
- UniProtKB/Swiss-Prot
- A6NDT9, B7ZLT9, B7ZVX5, Q70EL4, Q8N2C5, Q96DQ6
- Related
- ENSP00000285199.6, ENST00000285199.12
- Conserved Domains (1) summary
-
- COG5560
Location:96 → 711
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
9645260..9729687
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017024159.3 → XP_016879648.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X2
- UniProtKB/TrEMBL
-
V9GXZ5
- Related
- ENSP00000459328.3, ENST00000574408.5
- Conserved Domains (3) summary
-
- COG5560
Location:32 → 508
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
- cd02674
Location:337 → 505
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:44 → 81
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
-
XM_047435319.1 → XP_047291275.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X3
- UniProtKB/TrEMBL
-
V9GXZ5
-
XM_011523639.3 → XP_011521941.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X1
- Conserved Domains (3) summary
-
- cd02674
Location:509 → 677
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:102 → 221
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam12300
Location:36 → 107
- DUF3628; Protein of unknown function (DUF3628)
-
XM_047435320.1 → XP_047291276.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X5
-
XM_017024160.2 → XP_016879649.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X4
- UniProtKB/TrEMBL
-
V9GXZ5
- Conserved Domains (2) summary
-
- cd02674
Location:229 → 397
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:230 → 396
- UCH; Ubiquitin carboxyl-terminal hydrolase
-
XM_017024161.1 → XP_016879650.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X4
- UniProtKB/TrEMBL
-
V9GXZ5
- Conserved Domains (2) summary
-
- cd02674
Location:229 → 397
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:230 → 396
- UCH; Ubiquitin carboxyl-terminal hydrolase
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
9552990..9637424
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054315005.1 → XP_054170980.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X2
- UniProtKB/TrEMBL
-
V9GXZ5
-
XM_054315006.1 → XP_054170981.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X3
- UniProtKB/TrEMBL
-
V9GXZ5
-
XM_054315004.1 → XP_054170979.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X1
-
XM_054315009.1 → XP_054170984.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X5
-
XM_054315007.1 → XP_054170982.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X4
- UniProtKB/TrEMBL
-
V9GXZ5
-
XM_054315008.1 → XP_054170983.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X4
- UniProtKB/TrEMBL
-
V9GXZ5