NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001100624.3 → NP_001094094.2 centromere protein N isoform 2
See identical proteins and their annotated locations for NP_001094094.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate 3' terminal exon compared to variant 1. The resulting protein (isoform 2) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC092718, AK023669, BC039021, HY167728
- Consensus CDS
-
CCDS42200.1
- UniProtKB/Swiss-Prot
- A8MZE6, B3KN53, B4DJD1, B4DPY7, C9JJM5, D3DUK8, E7ES30, E7ETS3, Q96H22, Q9NZ83
- Related
- ENSP00000305608.5, ENST00000305850.10
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 339
- CENP-N; Kinetochore protein CHL4 like
-
NM_001100625.3 → NP_001094095.2 centromere protein N isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AK023669, AK026313, HY374758
- Consensus CDS
-
CCDS42199.1
- UniProtKB/Swiss-Prot
-
Q96H22
- Related
- ENSP00000377007.3, ENST00000393335.7
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 315
- CENP-N; Kinetochore protein CHL4 like
-
NM_001270473.2 → NP_001257402.1 centromere protein N isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an exon in the coding region and uses an alternate 3' terminal exon compared to variant 1. The resulting protein (isoform 4) is shorter than isoform 1.
- Source sequence(s)
-
AC092718, AK023669, AK296024, BC039021
- Consensus CDS
-
CCDS58483.1
- UniProtKB/Swiss-Prot
-
Q96H22
- Related
- ENSP00000395235.3, ENST00000439957.7
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 319
- CENP-N; Kinetochore protein CHL4 like
-
NM_001270474.2 → NP_001257403.1 centromere protein N isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an exon in the coding region and uses an alternate 3' terminal exon compared to variant 1. The resulting protein (isoform 5) is shorter than isoform 1.
- Source sequence(s)
-
AC092718, AK023669, AK298554, BC039021, HY363272
- Consensus CDS
-
CCDS58482.1
- UniProtKB/Swiss-Prot
-
Q96H22
- Related
- ENSP00000393991.2, ENST00000428963.6
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 305
- CENP-N; Kinetochore protein CHL4 like
-
NM_018455.6 → NP_060925.2 centromere protein N isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks several exons in the 3' coding region and uses an alternate 3' terminal exon, compared to variant 1. The resulting protein (isoform 3) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC007334, BQ013821, HY167728
- Consensus CDS
-
CCDS10931.1
- UniProtKB/TrEMBL
-
H3BMC7
- Related
- ENSP00000299572.5, ENST00000299572.9
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 165
- CENP-N; Kinetochore protein CHL4 like
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10 Reference GRCh38.p14 Primary Assembly
- Range
-
81007214..81033107
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006721236.5 → XP_006721299.1 centromere protein N isoform X1
See identical proteins and their annotated locations for XP_006721299.1
- UniProtKB/Swiss-Prot
- A8MZE6, B3KN53, B4DJD1, B4DPY7, C9JJM5, D3DUK8, E7ES30, E7ETS3, Q96H22, Q9NZ83
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 339
- CENP-N; Kinetochore protein CHL4 like
-
XM_047434366.1 → XP_047290322.1 centromere protein N isoform X2
-
XM_017023456.3 → XP_016878945.1 centromere protein N isoform X3
- UniProtKB/TrEMBL
-
H3BMC7
- Related
- ENSP00000454327.1, ENST00000564669.5
- Conserved Domains (1) summary
-
- pfam05238
Location:3 → 165
- CENP-N; Kinetochore protein CHL4 like
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791800.1 Reference GRCh38.p14 PATCHES
- Range
-
55152..81346
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333194.1 → XP_054189169.1 centromere protein N isoform X1
- UniProtKB/Swiss-Prot
- A8MZE6, B3KN53, B4DJD1, B4DPY7, C9JJM5, D3DUK8, E7ES30, E7ETS3, Q96H22, Q9NZ83
-
XM_054333196.1 → XP_054189171.1 centromere protein N isoform X3
- UniProtKB/TrEMBL
-
H3BMC7
-
XM_054333195.1 → XP_054189170.1 centromere protein N isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1 Alternate T2T-CHM13v2.0
- Range
-
87068448..87094631
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054313490.1 → XP_054169465.1 centromere protein N isoform X1
-
XM_054313492.1 → XP_054169467.1 centromere protein N isoform X3
- UniProtKB/TrEMBL
-
H3BMC7
-
XM_054313491.1 → XP_054169466.1 centromere protein N isoform X2