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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_033272.2 RefSeqGene
- Range
-
41373..171001
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_759
mRNA and Protein(s)
-
NM_020774.4 → NP_065825.1 E3 ubiquitin-protein ligase MIB1
See identical proteins and their annotated locations for NP_065825.1
Status: REVIEWED
- Source sequence(s)
-
AC091038, AC103987, AY149908
- Consensus CDS
-
CCDS11871.1
- UniProtKB/Swiss-Prot
- B0YJ38, Q2TB37, Q68D01, Q6YI51, Q86YT6, Q8NBY0, Q8TCB5, Q8TCL7, Q9P2M3
- Related
- ENSP00000261537.6, ENST00000261537.7
- Conserved Domains (9) summary
-
- PHA03095
Location:439 → 710
- PHA03095; ankyrin-like protein; Provisional
- cd02339
Location:83 → 127
- ZZ_Mind_bomb; Zinc finger, ZZ type. Zinc finger present in Drosophila Mind bomb (D-mib) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Mind bomb is an E3 ubiqitin ligase that has ...
- sd00045
Location:562 → 593
- ANK; ANK repeat [structural motif]
- cd16724
Location:818 → 854
- RING1-HC_MIB1; RING finger 1, HC subclass, found in mind bomb 1 (MIB1) and similar proteins
- cd16725
Location:865 → 901
- RING2-HC_MIB1; RING finger 2, HC subclass, found in mind bomb 1 (MIB1) and similar proteins
- cd16727
Location:962 → 1003
- RING3-HC_MIB1; RING finger 3, HC subclass, found in mind bomb 1 (MIB1) and similar proteins
- pfam06701
Location:154 → 218
- MIB_HERC2; Mib_herc2
- pfam12796
Location:670 → 770
- Ank_2; Ankyrin repeats (3 copies)
- pfam18346
Location:333 → 397
- SH3_15; Mind bomb SH3 repeat domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000018.10 Reference GRCh38.p14 Primary Assembly
- Range
-
21704916..21870953
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047437676.1 → XP_047293632.1 E3 ubiquitin-protein ligase MIB1 isoform X1
- UniProtKB/TrEMBL
-
B3KRA8
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XM_017025874.2 → XP_016881363.1 E3 ubiquitin-protein ligase MIB1 isoform X3
-
XM_017025875.2 → XP_016881364.1 E3 ubiquitin-protein ligase MIB1 isoform X4
-
XM_011526098.2 → XP_011524400.1 E3 ubiquitin-protein ligase MIB1 isoform X2
- Conserved Domains (4) summary
-
- cd00204
Location:34 → 162
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:110 → 206
- Ank_2; Ankyrin repeats (3 copies)
- pfam13920
Location:372 → 417
- zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
- sd00045
Location:72 → 103
- ANK; ANK repeat [structural motif]
RNA
-
XR_007066203.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060942.1 Alternate T2T-CHM13v2.0
- Range
-
21925869..22056013
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054318868.1 → XP_054174843.1 E3 ubiquitin-protein ligase MIB1 isoform X3
-
XM_054318869.1 → XP_054174844.1 E3 ubiquitin-protein ligase MIB1 isoform X4
-
XM_054318867.1 → XP_054174842.1 E3 ubiquitin-protein ligase MIB1 isoform X2
RNA
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XR_008485018.1 RNA Sequence