U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    4933409G03Rik RIKEN cDNA 4933409G03 gene [ Mus musculus (house mouse) ]

    Gene ID: 227998, updated on 27-Nov-2024

    Summary

    Official Symbol
    4933409G03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933409G03 geneprovided by MGI
    Primary source
    MGI:MGI:3045336
    See related
    Ensembl:ENSMUSG00000053896 AllianceGenome:MGI:3045336
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 18.6) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See 4933409G03Rik in Genome Data Viewer
    Location:
    2 C2; 2 39.53 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (68412757..68446807)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (68582413..68616463)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene Tax1 (human T-cell leukemia virus type I) binding protein 3 pseudogene Neighboring gene predicted gene, 36002 Neighboring gene RIKEN cDNA 4932414N04 gene Neighboring gene predicted gene, 36231 Neighboring gene predicted gene, 36174

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC227998

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177651.3NP_808319.1  uncharacterized protein LOC227998

      See identical proteins and their annotated locations for NP_808319.1

      Status: VALIDATED

      Source sequence(s)
      AK077128, AL844841
      Consensus CDS
      CCDS16085.1
      UniProtKB/TrEMBL
      Q8C5U0
      Related
      ENSMUSP00000099774.4, ENSMUST00000102713.11

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      68412757..68446807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)