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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021435.2 RefSeqGene
- Range
-
5002..67426
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001145149.3 → NP_001138621.1 vesicle-associated membrane protein 7 isoform 2
See identical proteins and their annotated locations for NP_001138621.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame segment compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AI522002, AJ271736, AJ549301, X92396
- Consensus CDS
-
CCDS48199.1
- UniProtKB/TrEMBL
-
B4DE96
- Related
- ENSP00000427822.1, ENSP00000518619.1, ENST00000460621.6, ENST00000711265.1
- Conserved Domains (2) summary
-
- cd15871
Location:83 → 147
- R-SNARE_VAMP7; SNARE motif of VAMP7
- cd14824
Location:27 → 75
- Longin; longin domain
-
NM_001185183.2 → NP_001172112.1 vesicle-associated membrane protein 7 isoform 3
See identical proteins and their annotated locations for NP_001172112.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an exon in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (3) is longer and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AI522002, AJ271736, AJ295938
- Consensus CDS
-
CCDS55548.1
- Related
- ENSP00000262640.6, ENSP00000518620.1, ENST00000262640.11, ENST00000711264.1
- Conserved Domains (2) summary
-
- pfam13774
Location:29 → 104
- Longin; Regulated-SNARE-like domain
- cl22856
Location:124 → 144
- SNARE; SNARE motif
-
NM_005638.6 → NP_005629.1 vesicle-associated membrane protein 7 isoform 1
See identical proteins and their annotated locations for NP_005629.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform (1).
- Source sequence(s)
-
AI522002, BC056141
- Consensus CDS
-
CCDS14770.4
- UniProtKB/Swiss-Prot
- P51809, Q53GY7, Q7Z409, Q9H4A7
- UniProtKB/TrEMBL
-
B2R6P4
- Related
- ENSP00000286448.6, ENSP00000518622.1, ENST00000286448.12, ENST00000711260.1
- Conserved Domains (2) summary
-
- cd15871
Location:124 → 188
- R-SNARE_VAMP7; SNARE motif of VAMP7
- cd14824
Location:4 → 116
- Longin; longin domain
RNA
-
NR_033714.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI522002, AJ271736, AK297385, X92396
-
NR_033715.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI522002, AJ271736, AK295605, X92396
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
155881345..155943769
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017029760.2 → XP_016885249.1 vesicle-associated membrane protein 7 isoform X2
- UniProtKB/TrEMBL
-
B4DE96
- Conserved Domains (2) summary
-
- cd15871
Location:77 → 141
- R-SNARE_VAMP7; SNARE motif of VAMP7
- cd14824
Location:3 → 69
- Longin; longin domain
-
XM_011531188.2 → XP_011529490.1 vesicle-associated membrane protein 7 isoform X1
See identical proteins and their annotated locations for XP_011529490.1
- Conserved Domains (2) summary
-
- pfam13774
Location:3 → 51
- Longin; Regulated-SNARE-like domain
- cl22856
Location:77 → 97
- SNARE; SNARE motif
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000024.10 Reference GRCh38.p14 Primary Assembly
- Range
-
57067865..57130289
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017030063.2 → XP_016885552.1 vesicle-associated membrane protein 7 isoform X2
- UniProtKB/TrEMBL
-
B4DE96
- Conserved Domains (2) summary
-
- cd15871
Location:77 → 141
- R-SNARE_VAMP7; SNARE motif of VAMP7
- cd14824
Location:3 → 69
- Longin; longin domain
-
XM_011545653.2 → XP_011543955.1 vesicle-associated membrane protein 7 isoform X1
See identical proteins and their annotated locations for XP_011543955.1
- Conserved Domains (2) summary
-
- pfam13774
Location:3 → 51
- Longin; Regulated-SNARE-like domain
- cl22856
Location:77 → 97
- SNARE; SNARE motif
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
154109337..154171772
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327627.1 → XP_054183602.1 vesicle-associated membrane protein 7 isoform X2
- UniProtKB/TrEMBL
-
B4DE96
-
XM_054327626.1 → XP_054183601.1 vesicle-associated membrane protein 7 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060948.1 Alternate T2T-CHM13v2.0
- Range
-
62306325..62368760
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054328325.1 → XP_054184300.1 vesicle-associated membrane protein 7 isoform X2
- UniProtKB/TrEMBL
-
B4DE96
-
XM_054328324.1 → XP_054184299.1 vesicle-associated membrane protein 7 isoform X1
-
XM_054328323.1 → XP_054184298.1 vesicle-associated membrane protein 7 isoform X4
- UniProtKB/Swiss-Prot
- P51809, Q53GY7, Q7Z409, Q9H4A7
- UniProtKB/TrEMBL
-
B2R6P4
-
XM_054328322.1 → XP_054184297.1 vesicle-associated membrane protein 7 isoform X3