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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051597.1 RefSeqGene
- Range
-
6372..145546
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001004470.3 → NP_001004470.1 alpha-2,8-sialyltransferase 8F isoform 1
See identical proteins and their annotated locations for NP_001004470.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AL158164, AL160289, BC137103
- Consensus CDS
-
CCDS31158.1
- UniProtKB/Swiss-Prot
- B0YJ97, B9EH72, P61647, Q5VZH4
- UniProtKB/TrEMBL
-
Q1HAZ0
- Related
- ENSP00000366827.4, ENST00000377602.5
- Conserved Domains (1) summary
-
- pfam00777
Location:138 → 391
- Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
-
NM_001345961.2 → NP_001332890.1 alpha-2,8-sialyltransferase 8F isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate exon in its 5' UTR, and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AL158164, AL160289
- Conserved Domains (1) summary
-
- pfam00777
Location:15 → 240
- Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
RNA
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NR_144322.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL158164, AL160289, BC144472
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
17315421..17454595 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017016174.2 → XP_016871663.1 alpha-2,8-sialyltransferase 8F isoform X1
- UniProtKB/TrEMBL
-
Q1HAZ0
-
XM_024447977.2 → XP_024303745.1 alpha-2,8-sialyltransferase 8F isoform X2
- Conserved Domains (1) summary
-
- pfam00777
Location:15 → 240
- Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
-
XM_024447978.2 → XP_024303746.1 alpha-2,8-sialyltransferase 8F isoform X2
- Conserved Domains (1) summary
-
- pfam00777
Location:15 → 240
- Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
-
XM_047425154.1 → XP_047281110.1 alpha-2,8-sialyltransferase 8F isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
17333849..17473031 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054365714.1 → XP_054221689.1 alpha-2,8-sialyltransferase 8F isoform X1
- UniProtKB/TrEMBL
-
Q1HAZ0
-
XM_054365716.1 → XP_054221691.1 alpha-2,8-sialyltransferase 8F isoform X2
-
XM_054365718.1 → XP_054221693.1 alpha-2,8-sialyltransferase 8F isoform X2
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XM_054365715.1 → XP_054221690.1 alpha-2,8-sialyltransferase 8F isoform X2
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XM_054365719.1 → XP_054221694.1 alpha-2,8-sialyltransferase 8F isoform X2
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XM_054365717.1 → XP_054221692.1 alpha-2,8-sialyltransferase 8F isoform X2