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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_145255.4 → NP_660298.2 large ribosomal subunit protein uL10m isoform a precursor
See identical proteins and their annotated locations for NP_660298.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the predominant transcript.
- Source sequence(s)
-
AI221522, BC039852, DA137043
- Consensus CDS
-
CCDS11516.1
- UniProtKB/Swiss-Prot
- A6NGJ4, Q7Z7H8, Q96B80, Q96Q55
- UniProtKB/TrEMBL
-
B4DEH0
- Related
- ENSP00000324100.4, ENST00000351111.7
- Conserved Domains (1) summary
-
- cd05797
Location:81 → 226
- Ribosomal_L10; Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein ...
-
NM_148887.3 → NP_683685.1 large ribosomal subunit protein uL10m isoform b
See identical proteins and their annotated locations for NP_683685.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) includes an additional coding region exon, compared to variant 1, that results in a longer protein (isoform b) with a longer and distinct N-terminus, compared to isoform a. The predicted protein does not contain a possible mitochondrial transit peptide sequence. A uORF with strong Kozak signal exists, but its length is short enough (18 aa) that it is not expected to interfere with translation from the longer, downstream ORF of 271 aa.
- Source sequence(s)
-
AC003665, AI221522, BC039852, DA137043
- Consensus CDS
-
CCDS11517.1
- UniProtKB/TrEMBL
-
B4DEH0
- Related
- ENSP00000395870.1, ENST00000414011.1
- Conserved Domains (1) summary
-
- cd05797
Location:91 → 236
- Ribosomal_L10; Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein ...
RNA
-
NR_037575.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI221522, AK293624, BC039852, DA137043
- Related
-
ENST00000421763.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
47823272..47831541 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024450575.2 → XP_024306343.1 large ribosomal subunit protein uL10m isoform X1
- UniProtKB/TrEMBL
-
B4DEH0
- Conserved Domains (1) summary
-
- cd05797
Location:91 → 236
- Ribosomal_L10; Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
48685040..48693314 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054315044.1 → XP_054171019.1 large ribosomal subunit protein uL10m isoform X1
- UniProtKB/TrEMBL
-
B4DEH0