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    PRR20B proline rich 20B [ Homo sapiens (human) ]

    Gene ID: 729233, updated on 10-Dec-2024

    Summary

    Official Symbol
    PRR20Bprovided by HGNC
    Official Full Name
    proline rich 20Bprovided by HGNC
    Primary source
    HGNC:HGNC:37220
    See related
    Ensembl:ENSG00000204918 AllianceGenome:HGNC:37220
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PRR20; PRR20A; PRR20C; PRR20D; PRR20E
    Summary
    This gene is one of five identical loci in a cluster on chromosome 13q21.1. The predicted protein is proline-rich and contains several dopamine D4 receptor signatures and PRINTS domains. [provided by RefSeq, Oct 2008]
    Annotation information
    Note: This gene is one of five identical loci in a cluster on chromosome 13q21.1. Similar gene clusters are suggested in rhesus, mouse, rabbit, dog, cow, platypus, and armadillo genomic sequences. [25 Jul 2008]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See PRR20B in Genome Data Viewer
    Location:
    13q21.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (57147488..57150509)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (56364358..56367378)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (57721622..57724643)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903235 Neighboring gene proline rich 20A Neighboring gene Sharpr-MPRA regulatory region 3887 Neighboring gene proline rich 20C Neighboring gene proline rich 20D

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    proline-rich protein 20B
    Names
    FLJ40296 protein family member
    Proline-rich protein 20A
    Proline-rich protein 20C
    Proline-rich protein 20D
    Proline-rich protein 20E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130404.1NP_001123876.1  proline-rich protein 20B

      See identical proteins and their annotated locations for NP_001123876.1

      Status: VALIDATED

      Source sequence(s)
      AL353652
      Consensus CDS
      CCDS45053.1
      UniProtKB/Swiss-Prot
      P86478, P86479, P86480, P86481, P86496, Q8N7V5
      Related
      ENSP00000367163.1, ENST00000377930.1
      Conserved Domains (1) summary
      pfam15708
      Location:1221
      PRR20; Proline-rich protein family 20

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      57147488..57150509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      56364358..56367378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)