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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001032372.2 → NP_001027544.1 zinc finger protein 226 isoform a
See identical proteins and their annotated locations for NP_001027544.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a). Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
AC138470, AF228418, BC024197, CD700800
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Related
- ENSP00000393265.1, ENST00000454662.6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001032373.2 → NP_001027545.1 zinc finger protein 226 isoform a
See identical proteins and their annotated locations for NP_001027545.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
BC024197, CD700800, CF596130
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Related
- ENSP00000336719.5, ENST00000337433.10
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001032374.2 → NP_001027546.1 zinc finger protein 226 isoform b
See identical proteins and their annotated locations for NP_001027546.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and coding region, as well as in the 5' UTR, compared to variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a. Variants 3, 4, and 6 all encode isoform b.
- Source sequence(s)
-
AC138470, BI457780, BX091242, CF596130
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Related
- ENSP00000407474.1, ENST00000413984.6
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001146220.3 → NP_001139692.1 zinc finger protein 226 isoform b
See identical proteins and their annotated locations for NP_001139692.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and uses an alternate 3' exon, compared to variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a. Variants 3, 4, and 6 all encode isoform b.
- Source sequence(s)
-
AK314724, BC017786, BX537487, DA178589
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Related
- ENSP00000467003.1, ENST00000588742.5
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001319088.2 → NP_001306017.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
BC024197, DA080156, DB015503
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001319089.2 → NP_001306018.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
BC024197, DA178589, DA435005
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001319090.2 → NP_001306019.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR compared to variant 1. Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
BC024197, DA178589, DA558473
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388168.1 → NP_001375097.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388169.1 → NP_001375098.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388170.1 → NP_001375099.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388171.1 → NP_001375100.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388172.1 → NP_001375101.1 zinc finger protein 226 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_001388173.1 → NP_001375102.1 zinc finger protein 226 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001388174.1 → NP_001375103.1 zinc finger protein 226 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001388175.1 → NP_001375104.1 zinc finger protein 226 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001388176.1 → NP_001375105.1 zinc finger protein 226 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001388177.1 → NP_001375106.1 zinc finger protein 226 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC138470
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_001388178.1 → NP_001375107.1 zinc finger protein 226 isoform c
Status: VALIDATED
- Source sequence(s)
-
AC138470, DA614159, DB117314
- Conserved Domains (4) summary
-
- COG5048
Location:323 → 738
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:329 → 349
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:220 → 266
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:270 → 321
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
NM_015919.4 → NP_057003.2 zinc finger protein 226 isoform b
See identical proteins and their annotated locations for NP_057003.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 3' UTR and coding region, as well as in the 5' UTR, compared to variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a. Variants 3, 4, and 6 all encode isoform b.
- Source sequence(s)
-
AC138470, BI457780, CD700800, CF596130
- Consensus CDS
-
CCDS46103.1
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Related
- ENSP00000300823.5, ENST00000300823.10
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
NM_016444.3 → NP_057528.2 zinc finger protein 226 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR compared to variant 1. Variants 1, 2, 7, 8, 9, and 10 all encode the same isoform (a).
- Source sequence(s)
-
AC138470, AF228418, BC024197, DB174587
- Consensus CDS
-
CCDS46102.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Related
- ENSP00000465121.1, ENST00000590089.5
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
44165100..44199490
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047439374.1 → XP_047295330.1 zinc finger protein 226 isoform X1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
-
XM_006723367.4 → XP_006723430.1 zinc finger protein 226 isoform X1
See identical proteins and their annotated locations for XP_006723430.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
XM_006723368.4 → XP_006723431.1 zinc finger protein 226 isoform X1
See identical proteins and their annotated locations for XP_006723431.1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
- Conserved Domains (5) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
- COG5048
Location:359 → 774
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:365 → 385
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:256 → 302
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd20908
Location:306 → 357
- SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
-
XM_047439376.1 → XP_047295332.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
-
XM_017027265.2 → XP_016882754.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
- Conserved Domains (1) summary
-
- smart00349
Location:8 → 67
- KRAB; krueppel associated box
-
XM_047439375.1 → XP_047295331.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
RNA
-
XR_007066992.1 RNA Sequence
-
XR_007066995.1 RNA Sequence
-
XR_007066994.1 RNA Sequence
-
XR_007066996.1 RNA Sequence
-
XR_002958356.2 RNA Sequence
-
XR_007066997.1 RNA Sequence
-
XR_002958357.2 RNA Sequence
-
XR_007066998.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
46987958..47000543
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322032.1 → XP_054178007.1 zinc finger protein 226 isoform X1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
-
XM_054322030.1 → XP_054178005.1 zinc finger protein 226 isoform X1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
-
XM_054322031.1 → XP_054178006.1 zinc finger protein 226 isoform X1
- UniProtKB/Swiss-Prot
- Q8WWE6, Q96TE6, Q9NS44, Q9NYT6
-
XM_054322035.1 → XP_054178010.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
-
XM_054322033.1 → XP_054178008.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
-
XM_054322034.1 → XP_054178009.1 zinc finger protein 226 isoform X2
- UniProtKB/TrEMBL
- B2RBM0, Q9Y2R1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001032375.1: Suppressed sequence
- Description
- NM_001032375.1: This RefSeq was permanently suppressed because it represents the same transcript variant as NM_001032374.1, although the latter has a longer 5' UTR.