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    mfsd-13.1 Major Facilitator Superfamily Domain containing homolog [ Caenorhabditis elegans ]

    Gene ID: 172111, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mfsd-13.1
    Official Full Name
    Major Facilitator Superfamily Domain containing homolog
    Primary source
    WormBase:WBGene00017886
    Locus tag
    CELE_F28B3.5
    See related
    AllianceGenome:WB:WBGene00017886
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human MFSD13A (major facilitator superfamily domain containing 13A). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mfsd-13.1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (4926635..4928840)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Transmembrane protein 230 Neighboring gene Importin N-terminal domain-containing protein Neighboring gene Phospholipid/glycerol acyltransferase domain-containing protein Neighboring gene AMP-dependent synthetase/ligase domain-containing protein;DMAP1-binding domain-containing protein Neighboring gene Chloride channel protein CLC-d Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Defect-buffering cellular plasticity increases robustness of metazoan embryogenesis. Xiao L, et al. Cell Syst, 2022 Aug 17. PMID 35882226
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Major Facilitator Superfamily Domain containing homolog
    NP_001360002.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class mfsd
    NP_491478.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class mfsd

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4926635..4928840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001372665.1 → NP_001360002.1  Major Facilitator Superfamily Domain containing homolog [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NJ1
      Conserved Domains (1) summary
      cl28910
      Location:9 → 190
      MFS; Major Facilitator Superfamily

    2. NM_059077.6 → NP_491478.1  Major Facilitator Superfamily Domain containing homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491478.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZU5
      Conserved Domains (1) summary
      pfam13347
      Location:4 → 451
      MFS_2; MFS/sugar transport protein
    Nucleotide Protein
    Heading Accession and Version

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