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    pals-26 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

    Gene ID: 181902, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pals-26
    Official Full Name
    Protein containing ALS2cr12 (ALS2CR12) signature
    Primary source
    WormBase:WBGene00007131
    Locus tag
    CELE_B0284.1
    See related
    AllianceGenome:WB:WBGene00007131
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including coelomocyte; intestine; nervous system; rectum; and reproductive system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pals-26 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (4375154..4378907)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Choline kinase B2 Neighboring gene ncRNA Neighboring gene Putative choline kinase B3 Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene RRM domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The purine nucleoside phosphorylase pnp-1 regulates epithelial cell resistance to infection in C. elegans. Tecle E, et al. PLoS Pathog, 2021 Apr. PMID 33878133, Free PMC Article
    2. The transcription factor ZIP-1 promotes resistance to intracellular infection in Caenorhabditis elegans. Lažetić V, et al. Nat Commun, 2022 Jan 10. PMID 35013162, Free PMC Article
    3. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
    4. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    5. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Protein containing ALS2cr12 (ALS2CR12) signature
    NP_497882.3
    • Product from WormBase gene class pals;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4375154..4378907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065481.8 → NP_497882.3  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497882.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17466
      Conserved Domains (1) summary
      PTZ00121
      Location:49 → 204
      PTZ00121; MAEBL; Provisional
    Nucleotide Protein
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