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    C25F9.4 SNF2 N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182905, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C25F9.4
    Official Full Name
    SNF2 N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00007724
    Locus tag
    CELE_C25F9.4
    See related
    AllianceGenome:WB:WBGene00007724
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Predicted to be involved in chromatin remodeling. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C25F9.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (19411127..19416575, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene SPK domain-containing protein Neighboring gene SNF2 N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene AAA_lid_7 domain-containing protein Neighboring gene HEPN domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SNF2 N-terminal domain-containing protein
    NP_507778.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19411127..19416575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075377.5 → NP_507778.3  SNF2 N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507778.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62078
      Conserved Domains (1) summary
      cl28899
      Location:217 → 440
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
    Nucleotide Protein
    Heading Accession and Version

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