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    CG15443 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33656, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15443provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031609
    Locus tag
    Dmel_CG15443
    See related
    AllianceGenome:FB:FBgn0031609
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15443
    Summary
    Orthologous to human TMCO6 (transmembrane and coiled-coil domains 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15443 in Genome Data Viewer
    Location:
    24F3-24F3; 2-12 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4461657..4463447, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4461657..4463447, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein L27A Neighboring gene mitochondrial ribosomal protein L27 Neighboring gene uncharacterized protein Neighboring gene Parkin Interacting Substrate Neighboring gene FIG4 phosphoinositide 5-phosphatase Neighboring gene inebriated

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer JL, et al. Nature, 2009 Apr 23. PMID 19363474, Free PMC Article
    2. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article
    3. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15443-PA
    CG15443-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4461657..4463447 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273100.1 → NP_001260029.1  uncharacterized protein Dmel_CG15443, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260029.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VR04
      Conserved Domains (2) summary
      sd00043
      Location:104 → 129
      ARM; armadillo repeat [structural motif]
      cl22454
      Location:101 → 190
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

    2. NM_134995.2 → NP_608839.1  uncharacterized protein Dmel_CG15443, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608839.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VR04
      Related
      FBpp0077140
      Conserved Domains (2) summary
      sd00043
      Location:104 → 129
      ARM; armadillo repeat [structural motif]
      cl22454
      Location:101 → 190
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VR04 Q9VR04

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