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    CG10600 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35142, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10600provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032717
    Locus tag
    Dmel_CG10600
    See related
    AllianceGenome:FB:FBgn0032717
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10600
    Summary
    Predicted to enable histone H4K20 demethylase activity. Predicted to be active in nucleus. Orthologous to several human genes including RSBN1 (round spermatid basic protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10600 in Genome Data Viewer
    Location:
    37B1-37B1; 2-54 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18833710..18839679, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18833710..18839679, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase family 36 member E1 Neighboring gene uncharacterized protein Neighboring gene Sterol carrier protein X-related thiolase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic regulatory blocks underlie extensive microsynteny conservation in insects. Engström PG, et al. Genome Res, 2007 Dec. PMID 17989259, Free PMC Article
    2. Cross-species identification of PIP5K1-, splicing- and ubiquitin-related pathways as potential targets for RB1-deficient cells. Parkhitko AA, et al. PLoS Genet, 2021 Feb. PMID 33591981, Free PMC Article
    3. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article
    4. Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library. Lowe N, et al. Development, 2014 Oct. PMID 25294943, Free PMC Article
    5. Transcription factor networks in Drosophila melanogaster. Rhee DY, et al. Cell Rep, 2014 Sep 25. PMID 25242320, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables histone H4K20 demethylase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10600-PA
    CG10600-PB
    CG10600-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      18833710..18839679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273618.1 → NP_001260547.1  uncharacterized protein Dmel_CG10600, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260547.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PG55

    2. NM_136069.4 → NP_609913.2  uncharacterized protein Dmel_CG10600, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609913.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ42
      Related
      FBpp0080665

    3. NM_001144367.2 → NP_001137839.1  uncharacterized protein Dmel_CG10600, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137839.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZX6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7YZX6 B7YZX6
    M9PG55 M9PG55
    Q9VJ42 Q9VJ42

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