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    CG4679 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36466, updated on 27-Dec-2024

    Summary

    Official Symbol
    CG4679provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033816
    Locus tag
    Dmel_CG4679
    See related
    AllianceGenome:FB:FBgn0033816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4679; RE17985p
    Summary
    Predicted to enable rRNA binding activity and ribosomal small subunit binding activity. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including adult head; anterior endoderm anlage; embryonic/larval midgut primordium; epithelial tube; and gut section. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 51. Orthologous to human PTCD3 (pentatricopeptide repeat domain 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG4679 in Genome Data Viewer
    Location:
    49F11-49F11; 2-68 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13237256..13239468, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9124761..9126973, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Quiescin sulfhydryl oxidase 1 Neighboring gene uncharacterized protein Neighboring gene Glutathione S transferase E14 Neighboring gene long non-coding RNA:CR45278

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables rRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ribosomal small subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ribosomal small subunit binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ribosomal small subunit binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG4679-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      13237256..13239468 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137010.3NP_610854.1  uncharacterized protein Dmel_CG4679 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610854.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1Z9A8, Q8MRC2, T2FGD8
      Related
      FBpp0086872
      Conserved Domains (2) summary
      PLN03218
      Location:210348
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:228255
      PPR; PPR repeat [structural motif]