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    nkt noktochor [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39264, updated on 9-Dec-2024

    Summary

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    Official Symbol
    nktprovided by FlyBase
    Official Full Name
    noktochorprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036146
    Locus tag
    Dmel_CG14141
    See related
    AllianceGenome:FB:FBgn0036146
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH33338; CG14141; CT33742; Dmel\CG14141; Nkt; NKT
    Summary
    Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See nkt in Genome Data Viewer
    Location:
    68B1-68B1; 3-35 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11201351..11202158)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11194451..11195258)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Glucuronyltransferase P Neighboring gene procollagen lysyl hydroxylase Neighboring gene uncharacterized protein Neighboring gene Ubiquitin protein ligase E3A Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Secreted Ig-Domain Protein Required in Both Astrocytes and Neurons for Regulation of Drosophila Night Sleep. Sengupta S, et al. Curr Biol, 2019 Aug 5. PMID 31353186, Free PMC Article
    2. Drosophila noktochor regulates night sleep via a local mushroom body circuit. Draper IR, et al. iScience, 2024 Mar 15. PMID 38380256, Free PMC Article
    3. Behaviorally consequential astrocytic regulation of neural circuits. Nagai J, et al. Neuron, 2021 Feb 17. PMID 33385325, Free PMC Article
    4. Regulation of rhythmic behaviors by astrocytes. Jackson FR, et al. Wiley Interdiscip Rev Dev Biol, 2020 Jul. PMID 31840430
    5. TRAP-seq Profiling and RNAi-Based Genetic Screens Identify Conserved Glial Genes Required for Adult Drosophila Behavior. Ng FS, et al. Front Mol Neurosci, 2016. PMID 28066175, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of sleep IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    noktochor
    Names
    CG14141-PA
    nkt-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      11201351..11202158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140193.4 → NP_648450.3  noktochor [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648450.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SX06, Q9VTG9
      Related
      FBpp0075895
      Conserved Domains (1) summary
      cd00096
      Location:82 → 154
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SX06 Q8SX06

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