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    agaW [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947647, updated on 3-Dec-2024

    Summary

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    Official Symbol
    agaW
    Primary source
    ECOCYC:G7633
    Locus tag
    b3134
    See related
    ASAP:ABE-0010299
    Gene type
    pseudo
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3122; yhaZ
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    Genomic context

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    Sequence:
    NC_000913.3 (3280701..3281102)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative tagatose-1,6-bisphosphate aldolase 1 chaperone Neighboring gene N-acetyl-D-galactosamine specific PTS enzyme IIB component Neighboring gene pseudo Neighboring gene putative galactosamine-6-phosphate deaminase/isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. Ray WK, et al. Mol Microbiol, 2004 Feb. PMID 14731281
    2. The genes and enzymes for the catabolism of galactitol, D-tagatose, and related carbohydrates in Klebsiella oxytoca M5a1 and other enteric bacteria display convergent evolution. Shakeri-Garakani A, et al. Mol Genet Genomics, 2004 Jul. PMID 15257457
    3. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    4. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
    5. Novel phosphotransferase genes revealed by bacterial genome sequencing: a gene cluster encoding a putative N-acetylgalactosamine metabolic pathway in Escherichia coli. Reizer J, et al. Microbiology (Reading), 1996 Feb. PMID 8932697

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

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