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    hemY protein HemY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948311, updated on 3-Dec-2024

    Summary

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    Official Symbol
    hemY
    Official Full Name
    protein HemY
    Primary source
    ECOCYC:EG10434
    Locus tag
    b3802
    See related
    ASAP:ABE-0012417
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3796
    Summary
    HemY is an inner membrane protein with two predicted transmembrane domains. [More information is available at EcoCyc: EG10434].
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    Genomic context

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    Sequence:
    NC_000913.3 (3986686..3987882, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative sulfatase AslA Neighboring gene ncRNA Neighboring gene PF04375 family protein HemX Neighboring gene uroporphyrinogen-III synthase Neighboring gene hydroxymethylbilane synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence of hemC, hemD and two additional E. coli genes. Alefounder PR, et al. Nucleic Acids Res, 1988 Oct 25. PMID 3054815, Free PMC Article
    2. Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes. Daniels DL, et al. Science, 1992 Aug 7. PMID 1379743
    3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in heme metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in porphyrin-containing compound biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein HemY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3986686..3987882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418246.1 protein HemY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418246.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TSQ2, A0A8T6Q920
      Conserved Domains (2) summary
      PRK10747
      Location:12 → 398
      PRK10747; putative protoheme IX biogenesis protein; Provisional
      sd00006
      Location:327 → 357
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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