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    rhsD protein RhsD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945116, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rhsD
    Official Full Name
    protein RhsD
    Primary source
    ECOCYC:EG10849
    Locus tag
    b0497
    See related
    ASAP:ABE-0001724
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0491
    Summary
    UniProtKB prediction of 26 aa signal peptide is a probable false positive. [More information is available at EcoGene: EG10849]. There are five homologous rhs loci that encode hydrophilic proteins with repetitive sequence elements and divergent C-termini . [More information is available at EcoCyc: EG10849].
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    Genomic context

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    Sequence:
    NC_000913.3 (523261..527541)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene NADP(+)-dependent aldehyde reductase YbbO Neighboring gene multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 Neighboring gene putative ABC transporter ATP-binding protein YbbA Neighboring gene putative ABC transporter membrane subunit YbbP Neighboring gene PF15631 family protein YbbC Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. rhs gene family of Escherichia coli K-12. Sadosky AB, et al. J Bacteriol, 1989 Feb. PMID 2644231, Free PMC Article
    2. A repetitive DNA sequence, rhs, responsible for duplications within the Escherichia coli K-12 chromosome. Lin RJ, et al. J Mol Biol, 1984 Jul 25. PMID 6086936
    3. A stationary-phase-dependent viability block governed by two different polypeptides from the RhsA genetic element of Escherichia coli K-12. Vlazny DA, et al. J Bacteriol, 1995 Apr. PMID 7721712, Free PMC Article
    4. Correlation of Rhs elements with Escherichia coli population structure. Hill CW, et al. Genetics, 1995 Sep. PMID 8536964, Free PMC Article
    5. Structure of the rhsA locus from Escherichia coli K-12 and comparison of rhsA with other members of the rhs multigene family. Feulner G, et al. J Bacteriol, 1990 Jan. PMID 2403547, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to sulfur starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RhsD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      523261..527541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415030.1 protein RhsD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415030.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A895P232
      Conserved Domains (2) summary
      COG3209
      Location:540 → 1417
      RhsA; Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only]
      cl21497
      Location:1 → 29
      PAAR_like; proline-alanine-alanine-arginine (PAAR) repeat superfamily
    Nucleotide Protein
    Heading Accession and Version

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