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    ecpB putative fimbrial chaperone EcpB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948806, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ecpB
    Official Full Name
    putative fimbrial chaperone EcpB
    Primary source
    ECOCYC:G6163
    Locus tag
    b0292
    See related
    ASAP:ABE-0001007
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0291; matC; yagY
    Summary
    O18K1H7 matABC genes are required for Mat fimbria formation when cloned in K-12. matA mRNA was detected in K-12, but not matBC mRNA. [More information is available at EcoGene: EG13564]. MatC is associated with the expression of Mat fimbriae in the meningitis-causing Escherichia coli O18K1H7. [More information is available at EcoCyc: G6163].
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    Genomic context

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    Sequence:
    NC_000913.3 (309358..310026, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial chaperone EcpE Neighboring gene fimbrial adhesin EcpD Neighboring gene putative fimbrial usher protein EcpC Neighboring gene common pilus major subunit Neighboring gene DNA-binding transcriptional dual regulator MatA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB. Garnett JA, et al. Acta Crystallogr F Struct Biol Commun, 2015 Jun. PMID 26057794, Free PMC Article
    2. matB, a common fimbrillin gene of Escherichia coli, expressed in a genetically conserved, virulent clonal group. Pouttu R, et al. J Bacteriol, 2001 Aug. PMID 11466275, Free PMC Article
    3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB has been reported.
      Title: Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative fimbrial chaperone EcpB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      309358..310026 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414826.1 putative fimbrial chaperone EcpB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414826.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1PJP1, A0A376MBP4
      Conserved Domains (2) summary
      pfam18649
      Location:150 → 221
      EcpB_C; EcpB C-terminal domain
      cl21716
      Location:5 → 175
      PapD_N; Pili and flagellar-assembly chaperone, PapD N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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