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    ybjP DUF3828 domain-containing lipoprotein YbjP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945491, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybjP
    Official Full Name
    DUF3828 domain-containing lipoprotein YbjP
    Primary source
    ECOCYC:G6450
    Locus tag
    b0865
    See related
    ASAP:ABE-0002941
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0856
    Summary
    Overexpression causes abnormal biofilm architecture and reduced motility. [More information is available at EcoGene: EG13685].
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    Genomic context

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    Sequence:
    NC_000913.3 (903952..904467, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter periplasmic binding protein ArtI Neighboring gene L-arginine ABC transporter ATP binding subunit Neighboring gene putative heavy metal binding protein YbjQ Neighboring gene N-acetylmuramoyl-L-alanine amidase D Neighboring gene putative epimerase YbjS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. Lacour S, et al. J Bacteriol, 2004 Nov. PMID 15489429, Free PMC Article
    2. Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. Tenorio E, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900028
    3. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    4. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF3828 domain-containing lipoprotein YbjP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      903952..904467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415386.1 DUF3828 domain-containing lipoprotein YbjP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415386.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0G012
      Conserved Domains (1) summary
      PRK10533
      Location:1 → 171
      PRK10533; putative lipoprotein; Provisional
    Nucleotide Protein
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