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    yhcC radical SAM family oxidoreductase YhcC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947733, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yhcC
    Official Full Name
    radical SAM family oxidoreductase YhcC
    Primary source
    ECOCYC:G7669
    Locus tag
    b3211
    See related
    ASAP:ABE-0010540
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3201
    Summary
    AFMB Structural Genomics target Number 51 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG12809].
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    Genomic context

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    Sequence:
    NC_000913.3 (3353121..3354050, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene peptidoglycan glycosyltransferase MtgA Neighboring gene low activity glyoxalase ElbB Neighboring gene ncRNA Neighboring gene sensor histidine kinase ArcB Neighboring gene glutamate synthase subunit GltB Neighboring gene glutamate synthase subunit GltD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An integrative computational model for large-scale identification of metalloproteins in microbial genomes: a focus on iron-sulfur cluster proteins. Estellon J, et al. Metallomics, 2014 Oct. PMID 25117543
    2. Regulation of the gltBDF operon of Escherichia coli: how is a leucine-insensitive operon regulated by the leucine-responsive regulatory protein? Ernsting BR, et al. J Bacteriol, 1993 Nov. PMID 7901196, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    radical SAM family oxidoreductase YhcC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3353121..3354050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417678.1 radical SAM family oxidoreductase YhcC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417678.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EEA5
      Conserved Domains (1) summary
      TIGR01212
      Location:6 → 302
      TIGR01212; radical SAM protein, TIGR01212 family
    Nucleotide Protein
    Heading Accession and Version

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