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    yibN putative sulfurtransferase YibN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948131, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yibN
    Official Full Name
    putative sulfurtransferase YibN
    Primary source
    ECOCYC:EG12295
    Locus tag
    b3611
    See related
    ASAP:ABE-0011805
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3601
    Summary
    glpE, yceA and yibN are paralogs. [More information is available at EcoGene: EG12295].
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    Genomic context

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    Sequence:
    NC_000913.3 (3784584..3785015, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate dehydrogenase Neighboring gene protein export chaperone SecB Neighboring gene reduced glutaredoxin 3 Neighboring gene 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Neighboring gene murein hydrolase activator EnvC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    3. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative sulfurtransferase YibN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3784584..3785015 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418068.1 putative sulfurtransferase YibN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418068.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DBC0, A0A8S0FF87
      Conserved Domains (1) summary
      cd00158
      Location:44 → 133
      RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
    Nucleotide Protein
    Heading Accession and Version

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