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    ymdA uncharacterized protein YmdA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949012, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ymdA
    Official Full Name
    uncharacterized protein YmdA
    Primary source
    ECOCYC:G6549
    Locus tag
    b1044
    See related
    ASAP:ABE-0003545
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1030
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    Genomic context

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    Sequence:
    NC_000913.3 (1105414..1105725)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene curlin, major subunit Neighboring gene curlin chaperone Neighboring gene 2'-O-acetyl-ADP-ribose deacetylase, regulator of RNase III activity Neighboring gene cardiolipin synthase C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CsrA-Mediated Translational Activation of ymdA Expression in Escherichia coli. Renda A, et al. mBio, 2020 Sep 15. PMID 32934077, Free PMC Article
    2. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CsrA-Mediated Translational Activation of ymdA Expression in Escherichia coli.
      Title: CsrA-Mediated Translational Activation of ymdA Expression in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein YmdA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1105414..1105725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415562.1 uncharacterized protein YmdA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415562.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828P2C7
      Conserved Domains (1) summary
      cl01416
      Location:25 → 49
      Fimbrial; Fimbrial protein
    Nucleotide Protein
    Heading Accession and Version

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