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    ydeP putative oxidoreductase YdeP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946055, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydeP
    Official Full Name
    putative oxidoreductase YdeP
    Primary source
    ECOCYC:G6791
    Locus tag
    b1501
    See related
    ASAP:ABE-0005001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1494
    Summary
    EvgAS regulon. [More information is available at EcoGene: EG13798]. YdeP overproduction causes resistance to low pH , and a yhiE mutant lacks stationary phase resistance to low pH . [More information is available at EcoCyc: G6791].
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    Genomic context

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    Sequence:
    NC_000913.3 (1584207..1586486, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator YdeO Neighboring gene two-component system connector SafA Neighboring gene putative fimbrial adhesin protein YdeQ Neighboring gene putative fimbrial protein YdeR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of enteropathogenic Escherichia coli mutants that fail to disrupt host cell spreading and attachment to substratum. Nadler C, et al. Infect Immun, 2006 Feb. PMID 16428726, Free PMC Article
    2. Molecular mechanism of transcriptional cascade initiated by the EvgS/EvgA system in Escherichia coli K-12. Itou J, et al. Biosci Biotechnol Biochem, 2009 Apr 23. PMID 19352034
    3. B1500, a small membrane protein, connects the two-component systems EvgS/EvgA and PhoQ/PhoP in Escherichia coli. Eguchi Y, et al. Proc Natl Acad Sci U S A, 2007 Nov 20. PMID 17998538, Free PMC Article
    4. Molybdenum cofactor-dependent resistance to N-hydroxylated base analogs in Escherichia coli is independent of MobA function. Kozmin SG, et al. Mutat Res, 2007 Jun 1. PMID 17349664, Free PMC Article
    5. Regulatory network of acid resistance genes in Escherichia coli. Masuda N, et al. Mol Microbiol, 2003 May. PMID 12694615

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables formate dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molybdenum ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to acidic pH EXP
    Inferred from Experiment
    more info
    		 PubMed 
    acts_upstream_of_or_within response to acidic pH IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative oxidoreductase YdeP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1584207..1586486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416018.1 putative oxidoreductase YdeP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416018.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7R556
      Conserved Domains (1) summary
      PRK09939
      Location:1 → 759
      PRK09939; acid resistance putative oxidoreductase YdeP
    Nucleotide Protein
    Heading Accession and Version

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