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    fixC putative oxidoreductase FixC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948958, updated on 17-Dec-2024

    Summary

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    Official Symbol
    fixC
    Official Full Name
    putative oxidoreductase FixC
    Primary source
    ECOCYC:EG11564
    Locus tag
    b0043
    See related
    ASAP:ABE-0000149
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0044; yaaS
    Summary
    The fix operon is expressed with the adjacent cai operon, suggesting that the fix operon may also be involved in anaerobic metabolism of carnitine . [More information is available at EcoCyc: EG11564].
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    Genomic context

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    Sequence:
    NC_000913.3 (44180..45466)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative electron transfer flavoprotein FixA Neighboring gene putative electron transfer flavoprotein FixB Neighboring gene putative ferredoxin FixX Neighboring gene putative transporter YaaU Neighboring gene regulator of KefC-mediated potassium transport and quinone oxidoreductase Neighboring gene K(+) : H(+) antiporter KefC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The distance between Escherichia coli genes is related to gene expression levels. Eyre-Walker A. J Bacteriol, 1995 Sep. PMID 7665529, Free PMC Article
    2. Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region. Buchet A, et al. J Bacteriol, 1998 May. PMID 9573142, Free PMC Article
    3. Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Yura T, et al. Nucleic Acids Res, 1992 Jul 11. PMID 1630901, Free PMC Article
    4. The fix Escherichia coli region contains four genes related to carnitine metabolism. Eichler K, et al. J Basic Microbiol, 1995. PMID 7473063
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carnitine metabolic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative oxidoreductase FixC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      44180..45466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414585.1 putative oxidoreductase FixC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414585.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7CTE6
      Conserved Domains (1) summary
      PRK10157
      Location:1 → 428
      PRK10157; putative oxidoreductase FixC; Provisional
    Nucleotide Protein
    Heading Accession and Version

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