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    pqqL periplasmic metalloprotease [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946059, updated on 3-Dec-2024

    Summary

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    Official Symbol
    pqqL
    Official Full Name
    periplasmic metalloprotease
    Primary source
    ECOCYC:EG11744
    Locus tag
    b1494
    See related
    ASAP:ABE-0004979
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1488; pqqE; pqqM; yddC
    Summary
    First 26 aa are predicted to be a type I signal peptide. pqqL and yhiJ are paralogs. [More information is available at EcoGene: EG11744]. PqqL is a putative zinc peptidase by similarity . [More information is available at EcoCyc: EG11744].
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    Genomic context

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    Sequence:
    NC_000913.3 (1572407..1575202, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-glutamate:4-aminobutyrate antiporter Neighboring gene glutamate decarboxylase B Neighboring gene putative TonB-dependent receptor YddB Neighboring gene ABC transporter family protein YddA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complementation of Methylobacterium organophilum mutants affected in pyrroloquinoline quinone biosynthesis genes pqqE and pqqF by cloned Escherichia coli chromosomal DNA. Turlin E, et al. FEMS Microbiol Lett, 1991 Sep 15. PMID 1663886
    2. Mutants of Escherichia coli producing pyrroloquinoline quinone. Biville F, et al. J Gen Microbiol, 1991 Aug. PMID 1659611
    3. Protease-associated import systems are widespread in Gram-negative bacteria. Grinter R, et al. PLoS Genet, 2019 Oct. PMID 31613892, Free PMC Article
    4. Sequence and functional analysis of an Escherichia coli DNA fragment able to complement pqqE and pqqF mutants from Methylobacterium organophilum. Turlin E, et al. Biochimie, 1996. PMID 9116051
    5. DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli. DeLisa MP, et al. J Bacteriol, 2001 Sep. PMID 11514505, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables peptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    periplasmic metalloprotease

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1572407..1575202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416011.1 periplasmic metalloprotease [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416011.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1Q9KVC4, A0A1X3JI88, A0A236MIE1
      Conserved Domains (1) summary
      COG0612
      Location:23 → 454
      PqqL; Predicted Zn-dependent peptidase [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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