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    sapD putrescine ABC exporter ATP binding protein SapD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946203, updated on 3-Dec-2024

    Summary

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    Official Symbol
    sapD
    Official Full Name
    putrescine ABC exporter ATP binding protein SapD
    Primary source
    ECOCYC:EG12304
    Locus tag
    b1291
    See related
    ASAP:ABE-0004342
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1286; trkE
    Summary
    Overexpression causes filamentous biofilm formation. [More information is available at EcoGene: EG12304]. SapABCDF (Sensitive to antimicrobial peptides) is a member of the ATP Binding Cassette (ABC) transporter superfamily . [More information is available at EcoCyc: EG12304].
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    Genomic context

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    Sequence:
    NC_000913.3 (1352636..1353628, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF559 domain-containing protein YcjD Neighboring gene putrescine ABC exporter ATP binding protein SapF Neighboring gene putrescine ABC exporter membrane protein SapC Neighboring gene putrescine ABC exporter membrane subunit SapB Neighboring gene putative periplasmic binding protein SapA Neighboring gene DUF2543 domain-containing protein YmjA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic analysis of potassium transport loci in Escherichia coli: evidence for three constitutive systems mediating uptake potassium. Dosch DC, et al. J Bacteriol, 1991 Jan. PMID 1987159, Free PMC Article
    2. Energy coupling to K+ uptake via the Trk system in Escherichia coli: the role of ATP. Stewart LM, et al. J Gen Microbiol, 1985 Jan. PMID 3886836
    3. Multiple mechanisms, roles and controls of K+ transport in Escherichia coli. Epstein W, et al. Biochem Soc Trans, 1993 Nov. PMID 8131887
    4. K+ uptake by fermenting Escherichia coli cells: pH dependent mode of the TrkA system operating. Trchounian A, et al. Biosci Rep, 2000 Aug. PMID 11092250
    5. Potassium transport loci in Escherichia coli K-12. Epstein W, et al. J Bacteriol, 1971 Nov. PMID 4942756, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables putrescine transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptide transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in peptide transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within potassium ion transmembrane transport EXP
    Inferred from Experiment
    more info
    		 PubMed 
    acts_upstream_of_or_within potassium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within putrescine transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putrescine ABC exporter ATP binding protein SapD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1352636..1353628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415807.1 putrescine ABC exporter ATP binding protein SapD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415807.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7K5C2, A0A8T6QBK1
      Conserved Domains (1) summary
      PRK15093
      Location:1 → 330
      PRK15093; peptide ABC transporter ATP-binding protein SapD
    Nucleotide Protein
    Heading Accession and Version

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