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    ycjS D-glucoside 3-dehydrogenase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948589, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycjS
    Official Full Name
    D-glucoside 3-dehydrogenase
    Primary source
    ECOCYC:G6653
    Locus tag
    b1315
    See related
    ASAP:ABE-0004416
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1310
    Summary
    Part of the putative ycjM-V operon, which encodes a putative transport and catabolism system for an unknown sugar. [More information is available at EcoGene: EG13916]. Based on sequence similarity, YcjS is predicted to be a D-galactose 1-dehydrogenase . [More information is available at EcoCyc: G6653].
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    Genomic context

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    Sequence:
    NC_000913.3 (1376832..1377887)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-guloside 3-dehydrogenase Neighboring gene 3-dehydro-D-guloside 4-epimerase Neighboring gene kojibiose phosphorylase Neighboring gene beta-phosphoglucomutase Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional Characterization of the ycjQRS Gene Cluster from Escherichia coli: A Novel Pathway for the Transformation of d-Gulosides to d-Glucosides. Mukherjee K, et al. Biochemistry, 2019 Mar 12. PMID 30742415, Free PMC Article
    2. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
    3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    D-glucoside 3-dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1376832..1377887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415831.1 D-glucoside 3-dehydrogenase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415831.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376JXK3, A0A3L9HLK0
      Conserved Domains (1) summary
      COG0673
      Location:7 → 351
      MviM; Predicted dehydrogenase [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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