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    ydiR putative electron transfer flavoprotein subunit YdiR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945688, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ydiR
    Official Full Name
    putative electron transfer flavoprotein subunit YdiR
    Primary source
    ECOCYC:G6921
    Locus tag
    b1698
    See related
    ASAP:ABE-0005668
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1696
    Summary
    AFMB Structural Genomics target Number 90 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG13977]. YdiO is predicted to be an acyl-CoA dehydrogenase . [More information is available at EcoCyc: G6921].
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    Genomic context

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    Sequence:
    NC_000913.3 (1780401..1781339)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative DNA-binding transcriptional regulator YdiP Neighboring gene putative electron transfer flavoprotein subunit YdiQ Neighboring gene putative electron transfer flavoprotein-quinone oxidoreductase YdiS Neighboring gene ferredoxin-like protein YdiT Neighboring gene short chain acyl-CoA synthetase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway. Campbell JW, et al. Mol Microbiol, 2003 Feb. PMID 12535077
    2. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables flavin adenine dinucleotide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative electron transfer flavoprotein subunit YdiR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1780401..1781339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416213.1 putative electron transfer flavoprotein subunit YdiR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416213.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N3C9L3
      Conserved Domains (1) summary
      PRK11916
      Location:1 → 312
      PRK11916; electron transfer flavoprotein subunit alpha
    Nucleotide Protein
    Heading Accession and Version

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