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    yedA putative transporter YedA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946461, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yedA
    Official Full Name
    putative transporter YedA
    Primary source
    ECOCYC:EG11141
    Locus tag
    b1959
    See related
    ASAP:ABE-0006505
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1957
    Summary
    YedA belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG11141]. DNA microarray analysis shows yedA is transiently repressed upon cold shock . [More information is available at EcoCyc: EG11141].
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    Genomic context

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    Sequence:
    NC_000913.3 (2029539..2030459)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YodC Neighboring gene DUF808 domain-containing inner membrane protein YedI Neighboring gene DNA mismatch endonuclease Vsr Neighboring gene DNA-cytosine methyltransferase Neighboring gene putative HD superfamily phosphohydrolase YedJ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Export of metabolites by the proteins of the DMT and RhtB families and its possible role in intercellular communication]. Zakataeva NP, et al. Mikrobiologiia, 2006 Jul-Aug. PMID 17025177
    2. Nucleotide sequence of the dcm locus of Escherichia coli K12. Hanck T, et al. Nucleic Acids Res, 1989 Jul 25. PMID 2527357, Free PMC Article
    3. Recruitment of genes and enzymes conferring resistance to the nonnatural toxin bromoacetate. Desai KK, et al. Proc Natl Acad Sci U S A, 2010 Oct 19. PMID 20921376, Free PMC Article
    4. Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli. Phadtare S, et al. J Bacteriol, 2004 Oct. PMID 15466053, Free PMC Article
    5. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to toxic substance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative transporter YedA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2029539..2030459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416468.1 putative transporter YedA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416468.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AZ89
      Conserved Domains (1) summary
      PRK11272
      Location:1 → 292
      PRK11272; putative DMT superfamily transporter inner membrane protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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