U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yfiL DUF2799 domain-containing lipoprotein YfiL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947106, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yfiL
    Official Full Name
    DUF2799 domain-containing lipoprotein YfiL
    Primary source
    ECOCYC:EG12446
    Locus tag
    b2602
    See related
    ASAP:ABE-0008565
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2599
    Summary
    First 16 aa are a type II signal peptide. [More information is available at EcoGene: EG12446].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (2741360..2741725)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene fused chorismate mutase/prephenate dehydrogenase Neighboring gene 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive Neighboring gene DUF4154 domain-containing protein YfiR Neighboring gene diguanylate cyclase DgcN Neighboring gene lipoprotein YfiB

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Nucleotide sequence and transcription of the phenylalanine and tyrosine operons of Escherichia coli K12. Hudson GS, et al. J Mol Biol, 1984 Dec 25. PMID 6396419
    2. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    3. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF2799 domain-containing lipoprotein YfiL

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2741360..2741725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417093.2 DUF2799 domain-containing lipoprotein YfiL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417093.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J1ZFR9, A0A7U9LV63, A0A7U9NZA6, A0AAN1VLD9, W1WSQ3
      Conserved Domains (1) summary
      PRK11443
      Location:2 → 121
      PRK11443; lipoprotein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.