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    yidK putative transporter YidK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948185, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yidK
    Official Full Name
    putative transporter YidK
    Primary source
    ECOCYC:EG11706
    Locus tag
    b3679
    See related
    ASAP:ABE-0012026
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3670
    Summary
    The YidK protein is an uncharacterised member of the SSS superfamily of sodium dependent solute transporters . [More information is available at EcoCyc: EG11706].
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    Genomic context

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    Sequence:
    NC_000913.3 (3858401..3860116, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene inner membrane protein YidG Neighboring gene DUF202 domain-containing inner membrane protein YidH Neighboring gene putative inner membrane protein YidI Neighboring gene putative sulfatase/phosphatase YidJ Neighboring gene putative DNA-binding transcriptional regulator YidL Neighboring gene pseudo Neighboring gene putative PTS enzyme II component GlvB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomewide landscape of gene-metabolome associations in Escherichia coli. Fuhrer T, et al. Mol Syst Biol, 2017 Jan 16. PMID 28093455, Free PMC Article
    2. First evidences for a third sulfatase maturation system in prokaryotes from E. coli aslB and ydeM deletion mutants. Benjdia A, et al. FEBS Lett, 2007 Mar 6. PMID 17303125
    3. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables D-glucose:sodium symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within galactose metabolic process RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    involved_in hexose transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter YidK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3858401..3860116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418135.1 putative transporter YidK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418135.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9ANX9
      Conserved Domains (1) summary
      COG4146
      Location:1 → 571
      YidK; Uncharacterized membrane permease YidK, sodium:solute symporter family [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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