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    hapstr1a HUWE1 associated protein modifying stress responses a [ Danio rerio (zebrafish) ]

    Gene ID: 327299, updated on 4-Jan-2025

    Summary

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    Official Symbol
    hapstr1aprovided by ZNC
    Official Full Name
    HUWE1 associated protein modifying stress responses aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5510
    See related
    Ensembl:ENSDARG00000055383 AllianceGenome:ZFIN:ZDB-GENE-030131-5510
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd20g11; zgc:66160; wu:fd20g11
    Summary
    Predicted to be located in nucleus. Is expressed in female organism. Orthologous to human HAPSTR1 (HUWE1 associated protein modifying stress responses). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
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    Genomic context

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    See hapstr1a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (27595037..27601812, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (27464195..27470970, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a Neighboring gene uncharacterized LOC137490601 Neighboring gene si:ch211-157c3.4 Neighboring gene ubiquitin specific peptidase 7 (herpes virus-associated) Neighboring gene pentraxin 4, long

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals. Knoll-Gellida A, et al. BMC Genomics, 2006 Mar 9. PMID 16526958, Free PMC Article
    2. Brain transcriptome analysis of a familial Alzheimer's disease-like mutation in the zebrafish presenilin 1 gene implies effects on energy production. Newman M, et al. Mol Brain, 2019 May 3. PMID 31053140, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    HUWE1-associated protein modifying stress responses 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328166.1 → NP_001315095.1  HUWE1-associated protein modifying stress responses 1

      Status: PROVISIONAL

      Source sequence(s)
      CR396594
      UniProtKB/TrEMBL
      A0A8M1P8W0, F1Q4T4
      Related
      ENSDARP00000072200.5, ENSDART00000077734.6

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      27595037..27601812 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_199781.1: Suppressed sequence

      Description
      NM_199781.1: This RefSeq was removed because it contains the wrong CDS.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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