U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C48D1.1 Leucine-rich repeat-containing protein 34;TIR domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178271, updated on 9-Dec-2024

    Summary

    Official Symbol
    C48D1.1
    Official Full Name
    Leucine-rich repeat-containing protein 34;TIR domain-containing protein
    Primary source
    WormBase:WBGene00008177
    Locus tag
    CELE_C48D1.1
    See related
    AllianceGenome:WB:WBGene00008177
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be part of Cul2-RING ubiquitin ligase complex. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See C48D1.1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (13193563..13197382, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Macro domain-containing protein Neighboring gene VWFD domain-containing protein Neighboring gene ncRNA Neighboring gene Cell death protein 3 subunit p17 Neighboring gene ncRNA

    General protein information

    Preferred Names
    Leucine-rich repeat-containing protein 34;TIR domain-containing protein
    NP_001040928.2
    • Confirmed by transcript evidence
    NP_001040929.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13193563..13197382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047463.3NP_001040928.2  Leucine-rich repeat-containing protein 34 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040928.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02227
      Conserved Domains (2) summary
      sd00033
      Location:124149
      LRR_RI; leucine-rich repeat [structural motif]
      cl42388
      Location:147228
      PPP1R42; protein phosphatase 1 regulatory subunit 42
    2. NM_001047464.4NP_001040929.2  TIR domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040929.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2EEN7
      Conserved Domains (1) summary
      cl42388
      Location:1293
      PPP1R42; protein phosphatase 1 regulatory subunit 42