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    A630076J17Rik RIKEN cDNA A630076J17 gene [ Mus musculus (house mouse) ]

    Gene ID: 319929, updated on 27-Nov-2024

    Summary

    Official Symbol
    A630076J17Rikprovided by MGI
    Official Full Name
    RIKEN cDNA A630076J17 geneprovided by MGI
    Primary source
    MGI:MGI:2442999
    See related
    AllianceGenome:MGI:2442999
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in liver E18 (RPKM 7.6), kidney adult (RPKM 4.6) and 5 other tissues See more
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    Genomic context

    See A630076J17Rik in Genome Data Viewer
    Location:
    3 F2.3; 3 46.72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (107137930..107141347)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (107230614..107234031)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 10 Neighboring gene STARR-seq mESC enhancer starr_08660 Neighboring gene chymosin Neighboring gene STARR-positive B cell enhancer ABC_E6103 Neighboring gene prokineticin 1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:107081789-107082089 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 4 Neighboring gene RNA binding motif protein 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC319929

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001256174.1NP_001243103.1  uncharacterized protein LOC319929

      See identical proteins and their annotated locations for NP_001243103.1

      Status: VALIDATED

      Source sequence(s)
      AA119196, AI452133, AK080367
      Consensus CDS
      CCDS57252.1
      UniProtKB/TrEMBL
      J3QQ32

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      107137930..107141347
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)