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    PA3507 short-chain dehydrogenase [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879158, updated on 24-Aug-2024

    Summary

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    Gene symbol
    PA3507
    Gene description
    short-chain dehydrogenase
    Locus tag
    PA3507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (3923759..3924556, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase Neighboring gene L-aspartate dehydrogenase Neighboring gene hypothetical protein Neighboring gene transcriptional regulator Neighboring gene hydrolase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The short-chain oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 contains an atypical catalytic center. Huether R, et al. Protein Sci, 2010 May. PMID 20340135, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The crystal structures of unligated and NADPH-complexed short-chain oxidoreductase (SCOR)Q9HYA2 were determined at 2.3 A resolution.
      Title: The short-chain oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 contains an atypical catalytic center.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    short-chain dehydrogenase
    NP_252197.1
    • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      3923759..3924556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252197.1 short-chain dehydrogenase [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252197.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9HYA2
      Conserved Domains (1) summary
      PRK07062
      Location:1 → 265
      PRK07062; SDR family oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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