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    Gpb5 Glycoprotein hormone beta 5 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355097, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gpb5provided by FlyBase
    Official Full Name
    Glycoprotein hormone beta 5provided by FlyBase
    Primary source
    FLYBASE:FBgn0063368
    Locus tag
    Dmel_CG40041
    See related
    AllianceGenome:FB:FBgn0063368
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    beta-glycoprotein-hormone-related; CG40041; Dmbeta; Dmel\CG40041; gpb5; GPB5
    Summary
    Enables protein heterodimerization activity. Contributes to G protein-coupled receptor binding activity and hormone activity. Involved in G protein-coupled receptor signaling pathway. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and extracellular space. Is expressed in adult GPA2/GPB5 neuron of the ventral nerve cord and larval GPA2/GPB5 neuron of the ventral nerve cord. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 23 with or without anosmia. Orthologous to several human genes including GPHB5 (glycoprotein hormone subunit beta 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Gpb5 in Genome Data Viewer
    Location:
    40F7-40F7; 2-54 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (23311700..23312464)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2LHet NW_001848855.1 (167215..167979)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR46450 Neighboring gene long non-coding RNA:CR46253 Neighboring gene Translocase of inner mitochondrial membrane 23 Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    contributes_to G protein-coupled receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    contributes_to hormone activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    glycoprotein hormone beta 5
    Names
    CG40041-PA
    CG40041-PC
    CG40041-PD
    Gpb5-PA
    Gpb5-PC
    Gpb5-PD
    beta-glycoprotein-hormone-related
    beta-glycoprotein-hormone-related-polypeptide
    glycoprotein hormone beta 5 ortholog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      23311700..23312464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001015386.3NP_001015386.3  glycoprotein hormone beta 5, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001015386.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      M0QVX8, Q4V4H2
      Conserved Domains (1) summary
      cd00069
      Location:12111
      GHB_like; Glycoprotein hormone beta chain homologues
    2. NM_001110864.2NP_001104334.1  glycoprotein hormone beta 5, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001104334.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4H2, Q8MLY9
      Conserved Domains (1) summary
      cd00069
      Location:45144
      GHB_like; Glycoprotein hormone beta chain homologues
    3. NM_001110865.3NP_001104335.1  glycoprotein hormone beta 5, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001104335.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V484, Q4V4C8
      Conserved Domains (1) summary
      cd00069
      Location:45144
      GHB_like; Glycoprotein hormone beta chain homologues