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    CG13409 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42592, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13409provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038926
    Locus tag
    Dmel_CG13409
    See related
    AllianceGenome:FB:FBgn0038926
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13409
    Summary
    Predicted to enable toxic substance binding activity. Is expressed in eye and spermatozoon. Orthologous to human TMEM181 (transmembrane protein 181). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13409 in Genome Data Viewer
    Location:
    94A1-94A1; 3-74 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22029440..22031900, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17855162..17857622, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cytochrome c heme lyase Neighboring gene NADH dehydrogenase (ubiquinone) 42 kDa subunit Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Fas-associated death domain Neighboring gene pitchoune

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sprinter: a novel transmembrane protein required for Wg secretion and signaling. Goodman RM, et al. Development, 2006 Dec. PMID 17108000
    2. A lysosomal tetraspanin associated with retinal degeneration identified via a genome-wide screen. Xu H, et al. EMBO J, 2004 Feb 25. PMID 14963491, Free PMC Article
    3. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
    4. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables toxic substance binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13409-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22029440..22031900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142747.4 → NP_651004.1  uncharacterized protein Dmel_CG13409 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651004.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V642, Q9VD53
      Related
      FBpp0083582
      Conserved Domains (1) summary
      pfam06664
      Location:195 → 492
      MIG-14_Wnt-bd; Wnt-binding factor required for Wnt secretion
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VD53 Q9VD53

    Gene LinkOut

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