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    CG12075 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31815, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12075provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030065
    Locus tag
    Dmel_CG12075
    See related
    AllianceGenome:FB:FBgn0030065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12075
    Summary
    Is expressed in several structures, including clypeo-labral primordium; dorsal epidermis primordium; embryonic anal pad; gland; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12075 in Genome Data Viewer
    Location:
    8B3-8B4; 1-25 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8838323..8872774)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8732356..8766807)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene LIM homeobox 1 Neighboring gene long non-coding RNA:CR45537 Neighboring gene Moesin Neighboring gene Uroporphyrinogen III synthase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection. Guzman RM, et al. Genetics, 2021 Mar 31. PMID 33789347, Free PMC Article
    2. Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster. Macdonald SJ, et al. Genetics, 2007 Jun. PMID 17435224, Free PMC Article
    3. TFOFinder: Python program for identifying purine-only double-stranded stretches in the predicted secondary structure(s) of RNA targets. Neugroschl A, et al. PLoS Comput Biol, 2023 Aug. PMID 37624852, Free PMC Article
    4. X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Legube G, et al. Genes Dev, 2006 Apr 1. PMID 16547175, Free PMC Article
    5. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12075-PA
    CG12075-PB
    CG12075-PC
    CG12075-PD
    CG12075-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8838323..8872774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001258653.1 → NP_001245582.1  uncharacterized protein Dmel_CG12075, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245582.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K0Y2, Q8T070, Q9W3B8
      Conserved Domains (1) summary
      cd00934
      Location:12 → 120
      PTB; Phosphotyrosine-binding (PTB) PH-like fold

    2. NM_001272431.1 → NP_001259360.1  uncharacterized protein Dmel_CG12075, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259360.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K0Y2, Q8T070, Q9W3B8
      Conserved Domains (1) summary
      cd00934
      Location:12 → 120
      PTB; Phosphotyrosine-binding (PTB) PH-like fold

    3. NM_206663.3 → NP_996386.1  uncharacterized protein Dmel_CG12075, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996386.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K0Y2, Q8T070, Q9W3B8
      Conserved Domains (1) summary
      cd00934
      Location:12 → 120
      PTB; Phosphotyrosine-binding (PTB) PH-like fold

    4. NM_001272430.1 → NP_001259359.1  uncharacterized protein Dmel_CG12075, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259359.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PE29, Q7K0Y2
      Conserved Domains (1) summary
      cd00934
      Location:12 → 120
      PTB; Phosphotyrosine-binding (PTB) PH-like fold

    5. NM_132278.4 → NP_572506.2  uncharacterized protein Dmel_CG12075, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572506.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K0Y2, Q8T070, Q9W3B8
      Related
      FBpp0071196
      Conserved Domains (1) summary
      cd00934
      Location:12 → 120
      PTB; Phosphotyrosine-binding (PTB) PH-like fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PE29 M9PE29
    Q7K0Y2 Q7K0Y2
    Q9W3B8 Q9W3B8

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