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    Elp4 Elongator complex protein 4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33775, updated on 9-Dec-2024

    Summary

    Official Symbol
    Elp4provided by FlyBase
    Official Full Name
    Elongator complex protein 4provided by FlyBase
    Primary source
    FLYBASE:FBgn0031711
    Locus tag
    Dmel_CG6907
    See related
    AllianceGenome:FB:FBgn0031711
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6907; Dmel\CG6907
    Summary
    Predicted to enable phosphorylase kinase regulator activity. Involved in establishment of mitotic spindle asymmetry. Part of elongator holoenzyme complex. Is expressed in several structures, including anterior endoderm; central brain primordium; embryonic/larval midgut; embryonic/larval midgut primordium; and mesoderm. Human ortholog(s) of this gene implicated in aniridia. Orthologous to human ELP4 (elongator acetyltransferase complex subunit 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Elp4 in Genome Data Viewer
    Location:
    25E5-25E5; 2-17 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5524139..5525809)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5524139..5525809)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene clot Neighboring gene Vacuolar protein sorting 52 Neighboring gene antisense RNA:CR44793 Neighboring gene Chromosome associated protein D3 Neighboring gene Cytochrome c oxidase copper chaperone COX11 Neighboring gene uncharacterized protein Neighboring gene Coenzyme Q6

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables phosphorylase kinase regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in establishment of mitotic spindle asymmetry IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in tRNA wobble uridine modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of elongator holoenzyme complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of elongator holoenzyme complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of elongator holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription elongation factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription elongation factor complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    elongator complex protein 4
    Names
    CG6907-PA
    CG6907-PB
    Elp4-PA
    Elp4-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      5524139..5525809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135088.2NP_608932.1  elongator complex protein 4, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608932.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VMQ7, X2J4N6
      Related
      FBpp0078729, FBtr0079096
      Conserved Domains (1) summary
      pfam05625
      Location:3436
      PAXNEB; PAXNEB protein
    2. NM_001298699.1NP_001285628.1  elongator complex protein 4, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285628.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VMQ7, X2J4N6
      Conserved Domains (1) summary
      pfam05625
      Location:3436
      PAXNEB; PAXNEB protein