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    Brs3 bombesin-like receptor 3 [ Mus musculus (house mouse) ]

    Gene ID: 12209, updated on 27-Nov-2024

    Summary

    Official Symbol
    Brs3provided by MGI
    Official Full Name
    bombesin-like receptor 3provided by MGI
    Primary source
    MGI:MGI:1100501
    See related
    Ensembl:ENSMUSG00000031130 AllianceGenome:MGI:1100501
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BRS-3
    Summary
    Predicted to enable neuropeptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in neuronal cell body. Predicted to be active in plasma membrane. Is expressed in lung; lung epithelium; lung mesenchyme; pons; and pons mantle layer. Orthologous to human BRS3 (bombesin receptor subtype 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Brs3 in Genome Data Viewer
    Location:
    X A6; X 30.78 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (56088434..56094118)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (57043074..57048758)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_47209 Neighboring gene MAP7 domain containing 3 Neighboring gene STARR-seq mESC enhancer starr_47210 Neighboring gene adhesion G protein-coupled receptor G4 Neighboring gene HIV TAT specific factor 1 Neighboring gene vestigial like family member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (7)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC129146, MGC129147

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables bombesin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuropeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in bombesin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    bombesin receptor subtype-3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009766.3NP_033896.2  bombesin receptor subtype-3

      See identical proteins and their annotated locations for NP_033896.2

      Status: VALIDATED

      Source sequence(s)
      AK038616
      Consensus CDS
      CCDS30150.1
      UniProtKB/Swiss-Prot
      O54798, O88790, Q544G9
      Related
      ENSMUSP00000033464.4, ENSMUST00000033464.4
      Conserved Domains (2) summary
      pfam00001
      Location:64328
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:137347
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      56088434..56094118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)