U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    glcF glycolate dehydrogenase, putative iron-sulfur subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 2847717, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    glcF
    Official Full Name
    glycolate dehydrogenase, putative iron-sulfur subunit
    Primary source
    ECOCYC:G0-8601
    Locus tag
    b4467
    See related
    ASAP:ABE-0174097
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    b2978; ECK2972; gox; yghL
    Summary
    GlcF could only be detected as a membrane-associated protein . [More information is available at EcoCyc: G0-8601].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3124236..3125459, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene malate synthase G Neighboring gene putative heme-binding protein GlcG Neighboring gene glycolate dehydrogenase, putative FAD-binding subunit Neighboring gene glycolate dehydrogenase, putative FAD-linked subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Glycolate oxidoreductase in Escherichia coli. Lord JM. Biochim Biophys Acta, 1972 May 25. PMID 4557653
    2. The intracellular localization of glycolate oxidoreductase in Escherichia coli. Sallal AK, et al. FEBS Lett, 1989 Dec 4. PMID 2689218
    3. The gene yghK linked to the glc operon of Escherichia coli encodes a permease for glycolate that is structurally and functionally similar to L-lactate permease. Núñez MF, et al. Microbiology (Reading), 2001 Apr. PMID 11283302
    4. Cross-induction of glc and ace operons of Escherichia coli attributable to pathway intersection. Characterization of the glc promoter. Pellicer MT, et al. J Biol Chem, 1999 Jan 15. PMID 9880556
    5. glc locus of Escherichia coli: characterization of genes encoding the subunits of glycolate oxidase and the glc regulator protein. Pellicer MT, et al. J Bacteriol, 1996 Apr. PMID 8606183, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables D-2-hydroxy-acid dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycolate dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glycolate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycolate dehydrogenase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycolate catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within glycolate catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    glycolate dehydrogenase, putative iron-sulfur subunit
    YP_026190.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3124236..3125459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026190.1 glycolate dehydrogenase, putative iron-sulfur subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026190.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EAM1
      Conserved Domains (1) summary
      PRK11274
      Location:1 → 404
      glcF; glycolate oxidase subunit GlcF
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.