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    hofB T2SSE family protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947481, updated on 3-Dec-2024

    Summary

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    Official Symbol
    hofB
    Official Full Name
    T2SSE family protein
    Primary source
    ECOCYC:EG12106
    Locus tag
    b0107
    See related
    ASAP:ABE-0000370
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0106; hopB
    Summary
    A hopB mutant shows defects in plasmid replication and maintenance . [More information is available at EcoCyc: EG12106].
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    Genomic context

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    Sequence:
    NC_000913.3 (115714..117099, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YacM Neighboring gene GMP reductase Neighboring gene inner membrane protein HofC Neighboring gene prepilin-type N-terminal cleavage/methylation domain-containing protein PpdD Neighboring gene quinolinate phosphoribosyltransferase (decarboxylating)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of gyrB mutants of Escherichia coli that are defective in partitioning of mini-F plasmids. Ogura T, et al. J Bacteriol, 1990 Mar. PMID 2155204, Free PMC Article
    2. Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli. Niki H, et al. J Bacteriol, 1988 Nov. PMID 3053654, Free PMC Article
    3. PpdD type IV pilin of Escherichia coli K-12 can Be assembled into pili in Pseudomonas aeruginosa. Sauvonnet N, et al. J Bacteriol, 2000 Feb. PMID 10633126, Free PMC Article
    4. Escherichia coli contains a set of genes homologous to those involved in protein secretion, DNA uptake and the assembly of type-4 fimbriae in other bacteria. Whitchurch CB, et al. Gene, 1994 Dec 2. PMID 7959070
    5. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    T2SSE family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      115714..117099 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414649.1 T2SSE family protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414649.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6PMV5
      Conserved Domains (1) summary
      PRK10436
      Location:1 → 459
      PRK10436; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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