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    yebE DUF533 domain-containing inner membrane protein YebE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946355, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yebE
    Official Full Name
    DUF533 domain-containing inner membrane protein YebE
    Primary source
    ECOCYC:EG11806
    Locus tag
    b1846
    See related
    ASAP:ABE-0006137
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1847
    Summary
    Deletion mutant available from Kim Lewis upon request. [More information is available at EcoGene: EG11806]. YebE is an inner membrane protein with one predicted transmembrane domain. [More information is available at EcoCyc: EG11806].
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    Genomic context

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    Sequence:
    NC_000913.3 (1929048..1929707, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative carbon-nitrogen hydrolase family protein YobB Neighboring gene exonuclease X Neighboring gene oligopeptidase B Neighboring gene secreted protein YebF Neighboring gene DNA damage-inducible protein YebG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli. Kumar JK, et al. Proc Natl Acad Sci U S A, 2004 Mar 16. PMID 15004283, Free PMC Article
    2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    4. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    5. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF533 domain-containing inner membrane protein YebE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1929048..1929707 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416360.1 DUF533 domain-containing inner membrane protein YebE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416360.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TZ02
      Conserved Domains (1) summary
      COG2979
      Location:1 → 217
      YebE; Uncharacterized membrane protein YebE, DUF533 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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