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    yjhI putative DNA-binding transcriptional regulator YjhI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949100, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjhI
    Official Full Name
    putative DNA-binding transcriptional regulator YjhI
    Primary source
    ECOCYC:G7912
    Locus tag
    b4299
    See related
    ASAP:ABE-0014092
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4288
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    Genomic context

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    Sequence:
    NC_000913.3 (4525015..4525803, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-xylonate dehydratase Neighboring gene putative 2-dehydro-3-deoxy-D-pentonate aldolase Neighboring gene putative DNA-binding transcriptional regulator SgcR Neighboring gene putative epimerase SgcE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    2. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    3. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YjhI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4525015..4525803 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418719.1 putative DNA-binding transcriptional regulator YjhI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418719.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3P5DHT2
      Conserved Domains (1) summary
      COG1414
      Location:8 → 251
      IclR; DNA-binding transcriptional regulator, IclR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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